Table 5. Deconvolution of pancreas test set.
Cell Type | Top 100 | Top 100 hierarchical | Augmented | Augmented hierarchical | Reference |
---|---|---|---|---|---|
acinar.cell | 7.40 | 4.32 | 10.82 | 8.89 | 5.78 |
alpha.cell | 7.93 | 9.01 | 7.94 | 14.41 | 36.24 |
beta.cell | 8.04 | 8.44 | 8.58 | 9.35 | 12.39 |
co.expression.cell | 12.33 | 7.95 | 10.03 | 8.55 | 1.68 |
delta.cell | 9.38 | 11.50 | 8.13 | 10.93 | 7.35 |
ductal.cell | 5.93 | 17.06 | 12.49 | 8.90 | 21.74 |
endothelial.cell | 0.00 | 13.80 | 2.58 | 7.91 | 0.53 |
epsilon.cell | 6.56 | 21.36 | 5.83 | 12.12 | 0.21 |
gamma.cell | 8.46 | 0.00 | 7.61 | 0.00 | 9.45 |
mast.cell | 0.00 | 0.00 | 1.72 | 8.51 | 0.32 |
MHC.class.II.cell | 0.00 | 6.56 | 2.88 | 5.83 | 0.32 |
PSC.cell | 0.00 | 0.00 | 5.93 | 0.55 | 2.31 |
unclassified.endocrine.cell | 33.97 | 0.00 | 15.47 | 4.05 | 1.68 |
others | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
RMSE | 12.76 | 10.68 | 9.44 | 8.91 | 0.00 |
ρ | 0.06 | 0.24 | 0.35 | 0.46 | 1.00 |
Blind deconvolution cell type estimates of the diabetic pancreas test set.