Table 4.
Online resources for acquiring protein interaction information.
Abbreviation | Name | URL | Availability | Data Source |
---|---|---|---|---|
DIP | Database of Interacting Proteins | http://dip.doe-mbi.ucla.edu/dip/Main.cgi | Academic license | Primary |
STRING | Search Tool for the Retrieval of Interacting Genes/Proteins | http://string-db.org/ | License purchase | Secondary |
IntAct | IntAct Molecular Interaction Database | http://www.ebi.ac.uk/intact | Free | Primary |
BioGRID | Biological General Repository for Interaction Datasets | http://www.thebiogrid.org/ | Free | Primary |
MINT | Molecular Interaction Database | http://mint.bio.uniroma2.it/ | Free | Primary |
I2D | Interologous Interaction Database | http://ophid.utoronto.ca/ | Academic license | Secondary |
CCSB | Center for Cancer Systems Biology Interactome Database | http://interactome.dfci.harvard.edu/ | Free | Primary |
APID | Agile Protein Interactomes DataServer | http://apid.dep.usal.es/ | Free | Secondary |
HuRI | The Human Reference Protein Interactome Mapping Project | http://interactome.baderlab.org/ | Academic license | Primary |
IID | Integrated Interactions Database | http://iid.ophid.utoronto.ca/iid/Search_By_Proteins/ | Academic license | Primary |