Table 1.

FPR and TPRs for the random, small world, and hybrid network structures. Competing methods are aDDT (theoretical DDT), eDDT (empirical DDT), Bin_B (binomial, Bonferroni correction), Bin_F (binomial, FDR corrected), and t test (10% density)

			n 1 = n 2 = 20					n 1 = n 2 = 40
			DDT		Binomial		t Test	DDT		Binomial		t Test
	Network structure	DWE	aDDT	eDDT	BinB	BinF	10%	aDDT	eDDT	BinB	BinF	10%
FPR	Random	4	0.021	0.046	0.002	0.001	0.052	0.019	0.046	0.002	0.002	0.052
		7	0.022	0.047	0.002	0.002	0.051	0.017	0.044	0.002	0.002	0.054
		11	0.020	0.046	0.002	0.002	0.052	0.014	0.044	0.003	0.002	0.055
		20	0.017	0.045	0.000	0.003	0.057	0.008	0.033	0.001	0.004	0.060
	Small world	4	0.022	0.046	0.001	0.001	0.050	0.019	0.045	0.002	0.002	0.054
		7	0.023	0.046	0.002	0.002	0.051	0.016	0.044	0.002	0.002	0.051
		11	0.020	0.045	0.002	0.002	0.052	0.012	0.042	0.003	0.002	0.055
		20	0.019	0.045	0.000	0.003	0.054	0.008	0.033	0.001	0.003	0.058
	Hybrid	4	0.024	0.042	0.001	0.002	0.054	0.019	0.045	0.001	0.001	0.055
		7	0.022	0.045	0.002	0.001	0.055	0.018	0.045	0.002	0.002	0.059
		11	0.020	0.046	0.002	0.002	0.054	0.015	0.046	0.002	0.002	0.064
		20	0.017	0.045	0.001	0.003	0.058	0.009	0.034	0.001	0.003	0.063
TPR	Random	4	0.370	0.458	0.036	0.049	0.111	0.710	0.891	0.123	0.112	0.203
		7	0.631	0.767	0.240	0.292	0.230	0.977	0.991	0.747	0.738	0.379
		11	0.893	0.885	0.694	0.686	0.450	1.000	0.999	0.999	0.998	0.619
		20	0.994	0.991	0.981	0.999	0.791	1.000	1.000	1.000	1.000	0.962
	Small world	4	0.287	0.505	0.040	0.034	0.131	0.699	0.913	0.113	0.123	0.227
		7	0.639	0.738	0.274	0.226	0.155	0.982	0.994	0.784	0.764	0.307
		11	0.895	0.908	0.696	0.692	0.551	1.000	0.999	0.998	0.999	0.840
		20	0.994	0.991	0.981	0.999	0.791	1.000	1.000	1.000	1.000	0.962
	Hybrid	4	0.284	0.423	0.042	0.052	0.255	0.650	0.884	0.136	0.114	0.435
		7	0.571	0.675	0.225	0.222	0.524	0.974	0.995	0.707	0.719	0.650
		11	0.874	0.888	0.693	0.693	0.681	0.999	1.000	0.997	0.994	0.739
		20	0.996	0.988	0.875	0.993	0.820	1.000	1.000	1.000	1.000	0.978

Abbreviations: DDT, difference degree test; DWE, differentially weighted edge; FPR, false positive rate; TPR, true positive rate.