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. 2019 Nov 7;8:e51177. doi: 10.7554/eLife.51177

Figure 1. The sharp transition between fixation and loss in mutator dynamics at different starting frequencies is due to limited sampling.

(A) Changes in the ratio of the mutator and the wild-type alleles of the E. coli mutT locus over time in continuous chemostat cultures. (Figure 1 from Chao and Cox, 1983). (B) In simulations, mutator trajectories in individual realizations initiated at different starting frequencies recapitulate the experimental observation of the frequency-threshold for mutator hitchhiking. Parameter values used are typical of microbial experimental populations (Raynes et al., 2018): N = 107, Udel = 10−4, Uben = 10−6, constant sben = 0.1, constant sdel = -0.1. Mutators mutate 100× faster than non-mutators. (C) Average mutator trajectories across realizations do not show evidence of the frequency-threshold. On average, mutators increase in frequency at all x0, showing that selection favors mutators independent of frequency. Average mutator frequency always eventually reaches the expected Pfixx0 (dashed horizontal lines) calculated in Figure 2. Mutator frequencies averaged across 106 simulation runs at x0= 10−7 and x0= 3×10−7, and across 105 simulation runs for all other starting frequencies. For simulations with exponentially distributed selection coefficients see Figure 1—figure supplement 1.

Figure 1—source data 1. Numerical data represented in Figure 1.
Data set includes mutator frequencies in randomly-chosen individual realizationss and mutator frequencies averaged across all realizations.

© 1983 John Wiley and Sons. All Rights Reserved

Figure 1 reproduced from Chao and Cox, 1983 with permission.

Figure 1.

Figure 1—figure supplement 1. Simulations with exponentially distributed selection coefficients confirm that the frequency-dependent threshold in mutator dynamics is due to limited sampling.

Figure 1—figure supplement 1.

(A) Mutator trajectories in individual realizations. (B) Average mutator trajectories across realizations. Mutator frequencies averaged across 105 simulation runs. Parameter values as in Figure 1 except N = 106, and beneficial and deleterious mutations are now randomly drawn from an exponential distribution with the mean sben = 0.1 and sdel = −0.1 respectively.
Figure 1—figure supplement 1—source data 1. Numerical data represented in Figure 1—figure supplement 1.
Data set includes mutator frequencies in randomly-chosen individual realizationss and mutator frequencies averaged across all realizations.