TABLE 2.
Select differentially expressed genes identified by comparison of the 33277 and 381 transcriptomesa
| Gene upregulated | Fold increase in RNA expression |
|---|---|
| Upregulated in 381 relative to 33277 | |
| PGN_1320 (permease) | 26.38 |
| PGN_1318 (ABC transporter) | 15.83 |
| PGN_1317 (gliding motility) | 11.20 |
| PGN_0288 (mfa2) | 4.18 |
| PGN_0287 (mfa1) | 3.70 |
| PGN_0289 (mfa3) | 3.57 |
| PGN_0180 (fimA) | 3.37 |
| PGN_0291 (mfa5) | 2.92 |
| PGN_0290 (mfa4) | 2.92 |
| PGN_0181 (fimB N terminus) | 1.97 |
| PGN_0183 (fimC) | 1.27 |
| PGN_0184 (fimD) | 1.19 |
| PGN_0182 (fimB C terminus) | 1.09 |
| Upregulated in 33277 relative to 381 | |
| PGN_1430 (HAE1 family) | 4.83 |
| PGN_1429 (conserved) | 4.29 |
| PGN_1841 (rpoA) | 4.08 |
| PGN_1843 (rpsK) | 3.97 |
| PGN_1842 (rpsD) | 3.90 |
| PGN_1904 (hagB) | 3.11 |
| PGN_1896 (wbaP) | 3.11 |
| PGN_1906 (hagC) | 2.99 |
| PGN_1877 (porW) | 2.55 |
| PGN_1054 (vimF) | 2.37 |
| PGN_1970 (rgpA) | 2.27 |
| PGN_0659 (HBP35) | 2.24 |
| PGN_1469 (dppIV) | 2.16 |
| PGN_0900 (prtT) | 2.14 |
| PGN_1466 (rgpB) | 2.11 |
| PGN_1728 (kgp) | 2.01 |
| PGN_0023 (porV) | 2.00 |
| PGN_0898 (PPAD) | 1.77 |
| PGN_0185 (fimE) | 1.22 |
a
Gene numbers correspond to 33277 annotations.