Antibodies |
|
anti-γH2AvD |
GeneTex |
RRID: AB_11165216
|
anti-8-oxo-dG |
Trevigen |
RRID: AB_1857195
|
anti-polyADPribose |
BD Biosciences |
RRID: AB_394263
|
anti-GFP |
Abcam |
RRID: AB_304896
|
anti-RFP |
MBL |
RRID: AB_591278
|
Streptavidin-Cy3 |
Jackson Immunoresearch |
RRID: AB_2337244
|
Biotinylated anti-mouse |
Vector labs |
RRID: AB_2687893
|
Biotinylated anti-rabbit |
Vector labs |
RRID: AB_2336201
|
Anti-DIG AP-conjugated antibody |
Sigma-Aldrich |
RRID: AB_2734716
|
|
Bacterial and Virus Strains |
|
Library Efficiency DH5α Competent Cells |
Invitrogen |
#18263012 |
|
Chemicals, Peptides, and Recombinant Proteins |
|
Vectashield |
Vector labs |
RRID: AB_2336789
|
Heptane |
Sigma |
#246654 |
Formaldehyde 37% |
Sigma |
# 47608 |
Methanol |
Sigma |
# 34860 |
Hydrogen peroxide |
Sigma |
#95321 |
Triton-X |
Sigma |
#X-100 |
Tween-20 |
Sigma |
# P9416 |
Trizol |
Invitrogen |
#15596026 |
10S Voltalef oil |
VWR |
#24627.188 |
DHE |
Invitrogen, Molecular Probes |
#D11347
|
H2DCF |
Invitrogen, Molecular Probes |
#D399 |
PBS |
Sigma |
#P5493 |
Bovine serum albumin |
Sigma |
#A3983 |
Proteinase K |
Invitrogen |
#25530049 |
Glycine |
Sigma |
#410225 |
Denhardts solution |
Invitrogen |
#750018 |
NBT |
Roche |
#11383213001 |
BCIP |
Roche |
#11383221001 |
Durcupan |
Sigma |
#44610 |
|
Critical Commercial Assays |
|
RNeasy Mini Kit |
QIAGEN |
# 74104 |
Thermo Scientific Maxima First Strand cDNA Synthesis Kit |
Thermo Scientific |
# K1641 |
PowerUp SYBR Green Supermix |
Applied Biosystems |
#A25741 |
|
Experimental Models: Organisms/Strains |
|
Drosophila: ubiquitous-moesin-GFP
|
[49] |
N/A |
Drosophila: serpent-Gal4
|
[50] |
N/A |
Drosophila: UAS-GFP
|
Bloomington Drosophila Stock Center |
RRID: BDSC_6874 |
Drosophila: dEcadherin-GFP
|
Kyoto Stock Center |
#109007 |
Drosophila: His2Av-mRFP1
|
Bloomington Drosophila Stock Center |
RRID: BDSC_23651 |
Drosophila: ARE-GFP
|
[23] |
N/A |
Drosophila: GstD-ARE:GFP
|
[22] |
N/A |
Drosophila: da-Gal4
|
Bloomington Drosophila Stock Center |
RRID: BDSC_55851 |
Drosophila: UAS-moesin-mCherry
|
[2] |
N/A |
Drosophila: OregonR
|
Bloomington Drosophila Stock Center |
RRID: BDSC_2376 |
Drosophila: UAS-Gadd45
|
[26] |
N/A |
Drosophila: UAS-dNrf2
|
[22] |
N/A |
Drosophila: UAS-Gadd45-RNAi
|
Bloomington Drosophila Stock Center |
RRID: BDSC_35023 |
Drosophila: UAS-dNrf2-RNAi
|
[22] |
N/A |
Drosophila: UAS-dNrf2-RNAi
|
Bloomington Drosophila Stock Center |
RRID: BDSC_40854 |
Drosophila: e22c-Gal4
|
Bloomington Drosophila Stock Center |
RRID: BDSC_1973 |
Drosophila: UAS-gcamp3
|
[17] |
N/A |
Drosophila: TRE-GFP
|
[23] |
N/A |
Drosophila: UAS-catalase
|
Bloomington Drosophila Stock Center |
RRID: BDSC_24621 |
Drosophila: UAS-Duox-RNAi
|
[51] |
N/A |
Drosophila: UAS-trpm-RNAi
|
Bloomington Drosophila Stock Center |
RRID: BDSC_31672 |
Drosophila: UAS-basket-DN
|
Bloomington Drosophila Stock Center |
RRID: BDSC_6409 |
Drosophila: srp3
|
[27] |
N/A |
Drosophila: srpAS
|
[27] |
N/A |
Drosophila: UAS-reaper
|
Bloomington Drosophila Stock Center |
RRID: BDSC_5824 |
|
Oligonucleotides |
|
dNrf2 F-primer CTGCATCGTCATGTCTTCCAGT |
Eurofins Genomics |
N/A |
dNrf2 R-primer AGCAAGTAGACGGAGCCAT |
Eurofins Genomics |
N/A |
Gadd45 F-primer GGTACTGCTGGAGGCCTTTT |
Eurofins Genomics |
N/A |
Gadd45 R-primer CGCAGTAGTCGACTAGCTGG |
Eurofins Genomics |
N/A |
Rpl32 F-primer AGCATACAGGCCCAAGATCG |
Eurofins Genomics |
N/A |
Rpl32 R-primer TGTTGTCGATACCCTTGGGC |
Eurofins Genomics |
N/A |
|
Recombinant DNA |
|
RE38191 cDNA clone |
BDGP |
# FBcl0207762 |
|
Software and Algorithms |
|
GraphPad Prism V6.01 |
GraphPad Software |
https://www.graphpad.com/scientific-software/prism/ |
ImageJ/Fiji |
National Institutes of Health |
https://imagej.nih.gov/ij/ |
Volocity |
PerkinElmer |
https://www.perkinelmer.com/lab-products-and-services/resources/cellular-imaging-software-downloads.html |
Photoshop |
Adobe |
https://www.adobe.com/uk/products/photoshop.html |
Illustrator |
Adobe |
https://www.adobe.com/uk/products/illustrator.html |