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. 2019 Nov 21;9:315. doi: 10.1038/s41398-019-0652-x

Table 2.

Weighted set of significantly enriched GO terms and pathways for genes commonly associated with bipolar disorder and BMI.

Gene set size Overlap Enrichment ratio p FDR Included genes
GO terms
 Neuronal cell body 486 29 2.08 1.0E−04 0.025 CAD, CHRNA3, CRTC1, CYP17A1, DDN, DGKI, DRD2, EEF1A2, FXR2, GNAT1, GNRH1, GRIK5, HPCA, ITPR3, KCNN2, KIF5A, KLC1, MAPK1, NRXN1, PARD3, PDE1C, PSEN1, RPTOR, RTN4, RTN4RL1, SLC1A3, SLC4A10, UCHL1, SHTN1
Pathways
 Hemostasis 620 38 2.25 2.1E−06 0.004 AK3, AKAP10, ALDOA, ATP2A1, ATP2A2, ATP2B2, CBX5, CDC37L1, CSK, DAGLA, DGKG, DGK1, ECM1, ITGAL, ITGB3, ITIH3, ITIH4, ITPR3, KIF5A, KLC1, MAPK1, MAPK3, MFN2, NEF2, OLA1, PDE3B, PLCG1, PPIL2, PRKACA, SH2B1, SLC7A6, SLC8A1, TUBA1A, TUBA1B, TUBA1C, TUBA4A, VCL, ZFPM2
 Signaling by Hedgehog 147 14 3.50 4.8E−05 0.020 ADCY9, DERL2, IFT172, IFT57, PRKACA, PSMA5, PSMB10, RPGRIP1L, SUFU, TUBA1A, TUBA1B, TUBA1C, TUBA4A, ULK3
 L1CAM interactions 117 12 3.76 8.1E−05 0.020 ITGB3, KCNQ2, MAP2K1, MAPK1, MAPK3, NCAM1, RPS6KA5, SHTN1, TUBA1A, TUBA1B, TUBA1C, TUBA4A
 Signaling by BRAF and RAF fusions 60 8 4.89 0.0002 0.030 CSK, ITGB3, MAP2K1, MAPK1, MAPK3, MARK3, QKI, VCL

Enriched GO terms and REACTOME pathways were obtained using the weighted set cover method implemented by WebGestalt, which reduces redundancy of the gene sets

BMI body mass index, FDR false discovery rate