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. 2019 Nov 12;2019:7129476. doi: 10.1155/2019/7129476

Table 2.

Genes analysed by real-time RT-PCR with Gene Bank accession numbers to gene sequence, full name, abbreviation, amplicon size and location in gene sequence, and primer characteristics.

Gene Bank acc. no. Gene Amplicon size (bp) (localization in the gene sequence) Primer (forward, F; reverse, R) sequence 5′→3′ Reference
NM_001009763.1 LEPR: leptin receptor 123 (665 (exon 6)–787 (exon 6/7))–encoding all forms of receptor F: CTGTGCCAACAGCCAAACT
R: GTGGATCAGGCTTCACAACA
Originally designed
NM_001009465.2 IL1B: interleukin-1β 137 (373–509) F: CAGCCGTGCAGTCAGTAAAA
R: GAAGCTCATGCAGAACACCA
[24]
NM_001206735.1 IL1R1: IL1 receptor, type I 124 (1455–1578) F: GGGAAGGGTCCACCTGTAAC
R: ACAATGCTTTCCCCAACGTA
[25]
NM_001046210.2 IL1R2: IL1 receptor, type II 161 (981–1141) F: CGCCAGGCATACTCAGAAA
R: GAGAACGTGGCAGCTTCTTT
[26]
NM_001009392.1 IL6: interleukin-6 165 (361–525) F: GTTCAATCAGGCGATTTGCT
R: CCTGCGATCTTTTCCTTCAG
[25]
NM_001110785.3 IL6R: IL6 receptor 149 (288–436) F: TCAGCGACTCCGGAAACTAT
R: CCGAGGACTCCACTCACAAT
[25]
XM_012096909.2 IL6ST: IL6 signal transducer (glycoprotein 130) 139 (573–711) F: GGCTTGCCTCCTGAAAAACC
R: ACTTCTCTGTTGCCCACTCAG
[27]
NM_001024860.1 TNFA: tumour necrosis factor 153 (426–578) F: CAAATAACAAGCCGGTAGCC
R: AGATGAGGTAAAGCCCGTCA
[25]
NM_001166185.1 TNFR1 (TNFRSF1A): TNF receptor, type I (TNF superfamily member 1A) 137 (310–446) F: AGGTGCCGGGATGAAATGTT
R: CAGAGGCTGCAGTTCAGACA
[25]
NM_001040490.2 TNFR2 (TNFRSF1B): TNF receptor, type II (TNF superfamily member 1B) 122 (772–893) F: ACCTTCTTCCTCCTCCCAAA
R: AGAAGCAGACCCAATGCTGT
[25]
NM_001190390.1 GAPDH: glyceraldehyde-3-phosphate dehydrogenase 143 (135–258) F: TGACCCCTTCATTGACCTTC
R: GATCTCGCTCCTGGAAGATG
[24]
NM_001009784.2 ACTB: beta actin 122 (426–547) F: GCCAACCGTGAGAAGATGAC
R: TCCATCACGATGCCAGTG
[26]
XM_004005023.3 HDAC1: histone deacetylase 1 115 (722–836) F: CTGGGGACCTACGGGATATT
R: GACATGACCGGCTTGAAAAT
[25]

Primers designed using Primer3web version 4.0.0 (http://bioinfo.ut.ee/primer3/).