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. 2019 Oct 30;2019:6124030. doi: 10.1155/2019/6124030

Table 5.

B cell epitope prediction from H, M, F, and N proteins; the position of peptides is according to the position of amino acids in the protein of the PPR virus.

H protein Peptide Start End Length Emini 1.000 Kolaskar 1.041
1 PHNK 16 19 4 2.683 0.969
2 SIDHQ 83 87 5 1.169 1.03
3 PPERV# 142 146 5 1.904 1.047
4 TVTL 305 308 4 0.505 1.113
5 TLGG 330 333 4 0.462 0.977
6 EANWVVPSTDVRDLQ 362 376 15 1.022 1.039
7 KTRPPSFCNGTG 387 398 12 1.314 0.982
8 GPWSEGRIP 400 408 9 1.023 0.962
9 DVSR 530 533 4 1.29 1.034

M protein Peptide Start End Length Emini 1.000 Kolaskar 1.037
1 SAWDV 10 14 5 0.533 1.044
2 GDRK 43 46 4 2.478 0.886
3 EDNDPLSP 60 67 8 3.167 0.969
4 DPLSP# 63 67 5 1.332 1.051
5 VGRT 69 72 4 0.795 1.01
6 PEEL 87 90 4 1.464 1.004
7 DNGYYS 167 172 6 2.116 0.975
8 INDD 325 328 4 1.203 0.915

F protein Peptide Start End Length Emini 1.000 Kolaskar 1.054
1 TGSA 34 37 4 0.867 0.965
2 SNQA 153 156 4 1.691 0.967
3 SLRDP 216 220 5 2.058 1.013
4 QEWYT 305 309 5 2.625 0.966
5 VFTP 331 334 4 0.643 1.112
6 GTVC 336 339 4 0.255 1.144
7 GSTKS 357 361 5 1.888 0.947
8 QDPDK 402 406 5 5.498 0.948
9 VGSREYPD 428 435 8 2.837 1.01
10 LKPDLTGTSKS 531 541 11 3.269 0.996

N protein Peptide Start End Length Emini 1.000 Kolaskar 1.014
1 DKAPTASGSGGAI 16 28 13 0.249 0.981
2 IPGDSSI 39 45 7 0.345 1.019
3 GDPDINGS 60 67 8 0.735 0.935
4 TDDPDV 92 97 6 1.569 0.992
5 STRSQS 107 112 6 2.397 0.972
6 GADLD 120 124 5 0.619 0.984
7 VTAPDTAADS 182 191 10 0.594 1.02
8 RTPGNKPR 242 249 8 4.853 0.92
9 KFSA 323 326 4 0.83 1.024
10 RGTGPRQA 408 415 8 1.69 0.943

Peptides revealed a higher score if they were shortened in all tools. #Epitopes that passed all the B cell prediction methods and were proposed as B cell epitopes.