Table 6.
Position of CTL epitopes in the H protein, M protein, F protein, and N protein of PPRV that bind with high affinity with the BoLA class I alleles.
| Peptide | Start | End | Allele | Percentile rank | |
| H protein | DLVKFISDK | 113 | 121 | BoLA-T2a | 2 |
| BoLA-T2C | 1.9 | ||||
| FLRVFEIGL | 251 | 259 | BoLA-HD6 | 1 | |
| GRIPAYGVI | 405 | 413 | BoLA-D18.4 | 2.3 | |
| BoLA-T2b | 2.1 | ||||
| LLAIAGIRL | 52 | 60 | BoLA-HD6 | 1.5 | |
| BoLA-T2b | 2.3 | ||||
| LSLIGLLAI | 47 | 55 | BoLA-T2a | 2.9 | |
| LVKFISDKI | 114 | 122 | BoLA-HD6 | 1.3 | |
| MFLSLIGLL | 45 | 53 | BoLA-HD6 | 2.1 | |
| BoLA-JSP.1 | 1.7 | ||||
| BoLA-T2b | 1.4 | ||||
| BoLA-T2C | 1.7 | ||||
| VMFLSLIGL | 44 | 52 | BoLA-JSP.1 | 2.6 | |
| BoLA-T2C | 1.7 | ||||
| WCYHDCLIY | 578 | 586 | BoLA-T2a | 1.2 | |
| WSEGRIPAY | 402 | 410 | BoLA-JSP.1 | 2.2 | |
|
| |||||
| M protein | SAWDVKGSI | 10 | 18 | BoLA-HD6 | 1.8 |
| EELLREATE | 88 | 96 | BoLA-T2b | 1 | |
| ELLREATEL | 89 | 97 | BoLA-HD6 | 1.3 | |
| PQRFRVVYM | 152 | 160 | BoLA-JSP.1 | 1.7 | |
| HVGNFRRKK | 220 | 228 | BoLA-T2a | 2.4 | |
| GGIGGTSLH | 251 | 259 | BoLA-T2a | 2 | |
| LHAQLGFKK | 270 | 278 | BoLA-T2a | 1.2 | |
| AQLGFKKIL | 272 | 280 | BoLA-T2C | 2.4 | |
| FKKILCYPL | 276 | 284 | BoLA-D18.4 | 1.2 | |
| BoLA-HD6 | 1.3 | ||||
| EFRVYDDVI | 316 | 324 | BoLA-HD6 | 2.6 | |
|
| |||||
| F protein | AGVALHQSL | 129 | 137 | BoLA-T2C | 1.7 |
| ASVLCKCYT | 387 | 395 | BoLA-T2a | 1.4 | |
| AYPTLSEIK | 280 | 288 | BoLA-T2a | 2.9 | |
| CSQNALYPM | 339 | 347 | BoLA-JSP.1 | 2.3 | |
| BoLA-T2a | 2.5 | ||||
| DETSCVFTP | 326 | 334 | BoLA-T2b | 2.7 | |
| DLGPAISLE | 443 | 451 | BoLA-T2C | 1.3 | |
| EKLDVGTNL | 451 | 459 | BoLA-T2b | 2.7 | |
| GSTKSCART | 357 | 365 | BoLA-T2a | 2.6 | |
| GTVCSQNAL | 336 | 344 | BoLA-JSP.1 | 2.5 | |
| BoLA-T2b | 1.6 | ||||
| GVALHQSLM | 130 | 138 | BoLA-HD6 | 2.1 | |
| IAYPTLSEI | 279 | 287 | BoLA-HD6 | 2.9 | |
| BoLA-JSP.1 | 2.3 | ||||
| IDLGPAISL | 442 | 450 | BoLA-D18.4 | 2.1 | |
| BoLA-T2b | 1.4 | ||||
| BoLA-T2C | 1.2 | ||||
| IQALSYALG | 227 | 235 | BoLA-T2b | 2.7 | |
| IQVGSREYP | 426 | 434 | BoLA-D18.4 | 2.8 | |
| KGIKARVTY | 259 | 267 | BoLA-D18.4 | 1.2 | |
| KPDLTGTSK | 532 | 540 | BoLA-T2a | 2.6 | |
| LEKLDVGTN | 450 | 458 | BoLA-T2b | 3 | |
| LIANCASVL | 382 | 390 | BoLA-HD6 | 1.6 | |
| LSKGNLIAN | 377 | 385 | BoLA-T2a | 3 | |
| LSYALGGDI | 230 | 238 | BoLA-HD6 | 1.8 | |
| BoLA-JSP.1 | 1.2 | ||||
| NALYPMSPL | 342 | 350 | BoLA-T2b | 1.5 | |
| PMSPLLQEC | 346 | 354 | BoLA-T2C | 3 | |
| RFILSKGNL | 374 | 382 | BoLA-T2b | 2 | |
| SIQALSYAL | 226 | 234 | BoLA-T2b | 1 | |
| SLMNSQAIE | 136 | 144 | BoLA-D18.4 | 3 | |
| BoLA-T2C | 2.5 | ||||
| SQNALYPMS | 340 | 348 | BoLA-D18.4 | 2.7 | |
| BoLA-HD6 | 1.7 | ||||
| BoLA-D18.4 | 2.3 | ||||
| STKSCARTL | 358 | 366 | BoLA-D18.4 | 3 | |
| BoLA-HD6 | 2.7 | ||||
| BoLA-JSP.1 | 1.6 | ||||
| BoLA-T2b | 2.9 | ||||
| BoLA-T2C | 2.7 | ||||
| TGTSKSYVR | 536 | 544 | BoLA-T2a | 2.9 | |
| TKSCARTLV | 359 | 367 | BoLA-D18.4 | 2.3 | |
| TLSEIKGVI | 283 | 291 | BoLA-D18.4 | 2.4 | |
| BoLA-T2C | 1.8 | ||||
| YVATQGYLI | 314 | 322 | BoLA-HD6 | 2 | |
| BoLA-T2C | 2.8 | ||||
|
| |||||
| N protein | ATLLKSLAL | 2 | 10 | BoLA-D18.4 | 1.6 |
| BoLA-JSP.1 | 1.3 | ||||
| BoLA-T2a | 2.6 | ||||
| BoLA-T2b | 1.9 | ||||
| TLLKSLALF | 3 | 11 | BoLA-D18.4 | 2.6 | |
| BoLA-HD6 | 3 | ||||
| BoLA-T2C | 1.3 | ||||
| QQLGEVAPY | 304 | 312 | BoLA-HD6 | 2.2 | |
| BoLA-JSP.1 | 3 | ||||
| BoLA-T2a | 1.4 | ||||
| BoLA-T2b | 2.9 | ||||
| YFDPAYFRL | 356 | 364 | BoLA-JSP.1 | 1.3 | |
| BoLA-T2b | 2.4 | ||||
| BoLA-T2C | 1.5 | ||||
| AYFRLGQEM | 360 | 368 | BoLA-HD6 | 1.6 | |
| BoLA-JSP.1 | 2.1 | ||||
| BoLA-T2C | 2.9 | ||||
| PRQAQVSFL | 412 | 420 | BoLA-JSP.1 | 1.7 | |
| BoLA-T2b | 2.2 | ||||
| BoLA-T2C | 2.6 | ||||
| RSAEALFRL | 490 | 498 | BoLA-D18.4 | 1.2 | |
| BoLA-HD6 | 1.2 | ||||
| BoLA-T2a | 1.9 | ||||
| BoLA-T2b | 2.9 | ||||
| BoLA-T2C | 2.7 | ||||