Table 1. Sampling and genome information of four assembled cp genomes.
The average coverage of each cp genomes was calculated by formula: (mapped reads * 150)/length of cp genome.
| S. transiliensis | T. candicans | T. candicans | T. yunnanense | |
|---|---|---|---|---|
| Genebank No. | MN267864 | MK333395 | MK522402 | MN365275 |
| Length of Genome(bp) | 142,143 | 142,261 | 141,948 | 142,714 |
| Mean coverage (X) | 1805 | 3371 | 187 | 908 |
| Raw data (GB) | 17.6 | 16.3 | 5.1 | 26.6 |
| GC content (%) | 37.4 | 37.4 | 37.4 | 37.3 |
| LSC length (bp) | 100,072 | 99,569 | 99,961 | 100,000 |
| LSC GC content (%) | 36.1 | 36.1 | 36.1 | 36.0 |
| SSC length (bp) | 17,513 | 17,536 | 17,533 | 17,514 |
| SSC GC content (%) | 31.1 | 31.1 | 31.1 | 30.9 |
| IR length (bp) | 12,279 | 12,578 | 12,227 | 12,600 |
| IR GC content (%) | 47.1 | 47.1 | 47.1 | 46.8 |
| CDS length(bp) | 68,586 | 68,577 | 68,561 | 65,044 |
| CDS GC content (%) | 37.8 | 37.9 | 37.9 | 37.9 |
| Protein coding genes | 80 | 80 | 80 | 80 |
| tRNAs | 35 | 35 | 35 | 35 |
| rRNAs | 8 | 8 | 8 | 8 |
| Total genes | 123 | 123 | 123 | 123 |