Table 1. Kinetic parameters for iodination and bromination reactions catalyzed by VirX1 with selected substrates.
The values for iodination (light purple columns) and bromination (light orange columns) reactions were determined by non-linear regression using Origin. All assays were performed in 200 μl total volume containing VirX1 (1 μM), an excess of the partner flavin reductase PrnF (10 μM), NADH (2.5 mM), NaBr/NaI (10 mM), FAD (10 μM) in phosphate buffer (50 mM, pH 7.4) and varied concentrations of substrate resuspended in DMSO and incubated at 28 °C. ND denotes not determined.
Compound | NaI | NaBr | ||||
---|---|---|---|---|---|---|
kcat (min-1) |
Km (μM) |
kcatKm (min-1 μM) |
kcat (min-1) |
Km (μM) |
kcat/Km (min-1 μM) |
|
1 | 5.0 ± 0.5 | 28 ± 2 | 0.179 ± 0.004 | 2.4 ± 0.6 | 53 ± 3 | 0.044 ± 0.008 |
2 | 3.1 ± 0.5 | 145 ± 9 | 0.021 ± 0.004 | 1.0 ± 0.1 | 201 ± 6 | 0.004 ± 0.001 |
3 | 1.3 ± 0.2 | 190 ± 6 | 0.006 ± 0.001 | ND | ND | ND |
4 | 4.4 ± 0.2 | 23 ± 2 | 0.193 ± 0.003 | 2.9 ± 0.5 | 31 ± 4 | 0.093 ± 0.002 |
5 | 3.3 ± 0.1 | 35 ± 1 | 0.094 ± 0.002 | 2.2 ± 0.2 | 33 ± 9 | 0.066 ± 0.004 |
6 | 3.5 ± 0.3 | 241 ± 4 | 0.014 ± 0.003 | 1.9 ± 0.1 | 310 ± 9 | 0.006 ± 0.001 |
7 | 1.5 ± 0.1 | 157 ± 3 | 0.009 ± 0.002 | 1.7 ± 0.2 | 227 ± 4 | 0.007 ± 0.003 |
8 | 3.0 ± 0.1 | 258 ± 7 | 0.011 ± 0.001 | 2.2 ± 0.2 | 254 ± 2 | 0.008 ± 0.002 |
10 | 3.4 ± 0.2 | 238 ± 13 | 0.014 ± 0.006 | 2.1 ± 0.3 | 282 ± 2 | 0.007 ± 0.003 |
11 | 1.6 ± 0.2 | 181 ± 6 | 0.008 ± 0.002 | ND | ND | ND |
12 | 2.9 ± 0.3 | 338 ± 18 | 0.008 ± 0.002 | ND | ND | ND |
14 | 2.2 ± 0.4 | 135 ± 12 | 0.016 ± 0.005 | 1.4 ± 0.1 | 240 ± 11 | 0.005 ± 0.001 |