Skip to main content
. Author manuscript; available in PMC: 2020 Apr 14.
Published in final edited form as: Nat Chem. 2019 Oct 14;11(12):1091–1097. doi: 10.1038/s41557-019-0349-z

Table 1. Kinetic parameters for iodination and bromination reactions catalyzed by VirX1 with selected substrates.

The values for iodination (light purple columns) and bromination (light orange columns) reactions were determined by non-linear regression using Origin. All assays were performed in 200 μl total volume containing VirX1 (1 μM), an excess of the partner flavin reductase PrnF (10 μM), NADH (2.5 mM), NaBr/NaI (10 mM), FAD (10 μM) in phosphate buffer (50 mM, pH 7.4) and varied concentrations of substrate resuspended in DMSO and incubated at 28 °C. ND denotes not determined.

Compound NaI NaBr
kcat
(min-1)
Km
(μM)
kcatKm
(min-1 μM)
kcat
(min-1)
Km
(μM)
kcat/Km
(min-1 μM)
1 5.0 ± 0.5   28 ± 2 0.179 ± 0.004 2.4 ± 0.6   53 ± 3 0.044 ± 0.008
2 3.1 ± 0.5 145 ± 9 0.021 ± 0.004 1.0 ± 0.1 201 ± 6 0.004 ± 0.001
3 1.3 ± 0.2 190 ± 6 0.006 ± 0.001 ND ND ND
4 4.4 ± 0.2   23 ± 2 0.193 ± 0.003 2.9 ± 0.5   31 ± 4 0.093 ± 0.002
5 3.3 ± 0.1   35 ± 1 0.094 ± 0.002 2.2 ± 0.2   33 ± 9 0.066 ± 0.004
6 3.5 ± 0.3 241 ± 4 0.014 ± 0.003 1.9 ± 0.1 310 ± 9 0.006 ± 0.001
7 1.5 ± 0.1 157 ± 3 0.009 ± 0.002 1.7 ± 0.2 227 ± 4 0.007 ± 0.003
8 3.0 ± 0.1 258 ± 7 0.011 ± 0.001 2.2 ± 0.2 254 ± 2 0.008 ± 0.002
10 3.4 ± 0.2   238 ± 13 0.014 ± 0.006 2.1 ± 0.3 282 ± 2 0.007 ± 0.003
11 1.6 ± 0.2 181 ± 6 0.008 ± 0.002 ND ND ND
12 2.9 ± 0.3   338 ± 18 0.008 ± 0.002 ND ND ND
14 2.2 ± 0.4   135 ± 12 0.016 ± 0.005 1.4 ± 0.1   240 ± 11 0.005 ± 0.001