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. 2019 Oct 17;26(10):1461–1468.e7. doi: 10.1016/j.chembiol.2019.08.003
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

Mouse monoclonal anti-PLPBP antibody (clone 1G2) OriGene Cat# TA505162; RRID: AB_2622886
Rabbit polyclonal anti-SHMT2 antibody abbexxa Cat# abx128462
Rabbit polyclonal anti-PNPO antibody Sigma Cat# HPA023204; RRID: AB_1855506
Rabbit polyclonal anti-ALAS1 antibody Thermo Fisher Scientific Cat# PA5-57434; RRID: AB_2637832
Rabbit polyclonal anti-SHMT1 antibody abcam Cat# ab55736; RRID: AB_2285970
Goat anti-rabbit antibody conjugated to horseradish peroxidase invitrogen Cat# 32260
Goat anti-mouse antibody conjugated to horseradish peroxidase invitrogen Cat# 32230
Mouse monoclonal anti-PLK antibody Santa Cruz Biotechnology, Inc. Cat# sc-365173, RRID: AB_10708566
Rabbit polyclonal anti-PL antibody GeneTex Cat# GTX12625

Bacterial and Virus Strains

Escherichia coli Rosetta 2 (DE3) Merck Cat# 71400

Chemicals, Peptides, and Recombinant Proteins

PL1 Hoegl et al., 2018 N/A
PL2 Hoegl et al., 2018 N/A
PL3 Hoegl et al., 2018 N/A
Glycosylceramidase (GBA) ProSpec Cat# enz-908
Lysyl Endopeptidase Wako Cat# 125-05061
Trypsin, Sequencing grade Promega Cat# V5111
l-Penicillamine TCI Cat# P1370
d-Penicillamine Acros Organics via Fisher Scientific Cat# 10224750
BTTAA ligand Jena Bioscience Cat# CLK-067-25

Critical Commercial Assays

Roti Quant Universal Roth Cat# 0120.1
Pierce™ BCA Protein Assay Kit Thermo Fisher Scientific Cat# 23225
ECI western blotting substrate solution Pierce Cat# PIER80196
Ponceau S Sigma Cat# P3504

Deposited Data

raw files, Fasta files, and MaxQuant analysis to PRIDE This manuscript https://www.ebi.ac.uk/pride/archive/; PXD014771

Experimental Models: Cell Lines

Human HeLa cell line ECACC via Sigma Aldrich Cat# 93021013; RRID: CVCL_0030
Human K562 cell line ECACC via Sigma Aldrich Cat# 89121407; RRID: CVCL_0004
Human HCT116 cell line ECACC via Sigma Aldrich Cat# 91091005; RRID: CVCL_0291
Human HEK293 cell line ECACC via Sigma Aldrich Cat# 85120602; RRID: CVCL_0045

Oligonucleotides

hPLK forward primer (5’->3’): ggggacaagtttgtacaaaaaa
gcaggctttgagaatctttattttcagggcgaggaggagtgccgggtg
eurofins custom made
hPLK reverse primer (5’->3’): ggggaccactttgtacaagaaa
gctgggtgtcacagcaccgtggcctgg
eurofins custom made
SHMT1 forward primer (5’->3’): ggggacaagtttgtacaaaaa
agcaggCtttgagaatctttattttcagggcacgatgccagtcaacgggg
eurofins custom made
SHMT1 reverse primer (5’->3’): ggggaccactttgtacaagaaa
gctgggtgtcagaagtcaggcaggccag
eurofins custom made
PLPBP forward primer (5’->3’): ggggacaagtttgtacaaaaaa
gcagGctttgagaatctttattttcagggctggagagctggcagcatgtcg
eurofins custom made
PLPBP reverse primer (5’->3’): ggggaccactttgtacaagaaa
gctgggtgtcagtgctcctgtgccacctc
eurofins custom made

Recombinant DNA

Human cDNA library from HeLa BioAcademia Cat# 02-723
SHMT1 ORF clone, NM_004169 GeneScript Cat# OHu21374
PLPBP ORF clone, NM_007198.3 GeneScript Cat# OHu09065
SHMT1_pDest007 This manuscript Addgene ID: 131229 (http://www.addgene.org)
hPLK_pDest007 This manuscript Addgene ID: 131230 (http://www.addgene.org)
PLPBP_pDest007 This manuscript Addgene ID: 131231 (http://www.addgene.org)

Software and Algorithms

MaxQuant software MPI Biochemistry Martinsried http://www.biochem.mpg.de/5111795/maxquant
Perseus software MPI Biochemistry Martinsried http://www.biochem.mpg.de/5111810/perseus
Gene Ontology annotation file Ashburner et al., 2000 http://geneontology.org/page/download-go-annotations
Prism 6 software GraphPad RRID: SCR_002798
Protein Deconvolution Software Thermo Fisher Scientific Cat# IQLAAEGAB
SFANOMBAQ

Other

InfiniteM200 PRO reader TECAN Cat# IN-MNANO
StrepTrap HP column GE Healthcare Cat# 28-9075
Superdex 200 10/300 GL GE Healthcare Cat# 17517501
Superdex 75 10/300 GL GE Healthcare via Sigma Aldrich Cat# GE17-5174-01
HiTrap Desalting column GE Healthcare Cat# 17-1408-01
SYPRO orange protein gel stain Thermo Fisher Scientific Cat# S6650
CFX96 Real-Time System Bio-Rad Cat# 20421
Roti-PVDF, 0.2 μm Roth Cat# 8989.1
Trans-Bot SD Semi-Dry Transfer Cell Bio-Rad Cat# 1703940
Luminescent LAS 4000 image analyzer Fujifilm, ordered via GE Healthcare Cat# 28955810
Sep-Pak C18 columns Waters Cat# WAT054960