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. Author manuscript; available in PMC: 2019 Nov 25.
Published in final edited form as: J Biomol Struct Dyn. 2016 Nov 29;35(15):3354–3369. doi: 10.1080/07391102.2016.1254682

Figure 5.

Figure 5.

Transition pathways of clusters in the simulations of aptamer-unbound and aptamer-bound simulations. Only sampled clusters for each system were plotted. Every 100 ps stands for one iteration step in the transition pathway calculation.