Table 1. Composition of Vachellia nilotica and Senegalia senegal cp genomes with related species.
Size (bp) | Overall GC contents | LSC size in bp | SSC size in bp | IR size in bp | Protein coding regions size in bp | tRNA size in bp | rRNA size in bp | Number of genes | Number of protein coding genes | Number of rRNA | Number of tRNA | Genes with introns | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V. nilotica | 165,343 | 35.4 | 93849 | 19308 | 26093 | 79520 | 2847 | 9052 | 135 | 89 | 8 | 38 | 22 |
V. seyal | 165,383 | 35.3 | 93901 | 19347 | 26068 | 78009 | 2828 | 9052 | 127 | 82 | 8 | 37 | 21 |
V. flava | 165,829 | 35.3 | 94220 | 19474 | 26068 | 78033 | 2828 | 9052 | 127 | 82 | 8 | 37 | 21 |
S. Senegal | 162702 | 35.7 | 91791 | 18895 | 26008 | 75571 | 2794 | 9052 | 132 | 87 | 8 | 37 | 22 |
S. Laeta | 162754 | 35.8 | 91750 | 18911 | 26047 | 77997 | 2829 | 9052 | 127 | 82 | 8 | 37 | 20 |
S. saman | 176717 | 35.3 | 92036 | 5053 | 39814 | 89202 | 2793 | 9052 | 138 | 92 | 8 | 37 | 21 |
p. flexicaula | 178887 | 35.1 | 91076 | 4805 | 41503 | 89784 | 2793 | 9078 | 139 | 94 | 8 | 37 | 23 |
P. communis | 162,552 | 35.9 | 91517 | 18941 | 26047 | 77949 | 2793 | 9052 | 130 | 83 | 8 | 37 | 23 |
P. javanica | 161,681 | 35.9 | 91093 | 18574 | 26007 | 78075 | 2794 | 9052 | 130 | 83 | 8 | 37 | 23 |
P. pruinosum | 176,692 | 35.3 | 92320 | 5036 | 39668 | 89271 | 2793 | 9052 | 138 | 92 | 8 | 37 | 24 |
L. trichandra | 164692 | 35.6 | 93690 | 18890 | 26056 | 78759 | 2815 | 9049 | 129 | 84 | 8 | 37 | 22 |
I. leiocalycina | 175489 | 35.5 | 90987 | 4948 | 39777 | 89244 | 2820 | 9056 | 137 | 92 | 8 | 37 | 24 |
F. albida | 175646 | 35.3 | 91045 | 4761 | 39920 | 88638 | 2793 | 9068 | 138 | 90 | 8 | 37 | 23 |
D. cinerea | 161240 | 35.9 | 90430 | 18526 | 26142 | 77958 | 2793 | 9068 | 130 | 83 | 8 | 37 | 23 |
A. lucyi | 176870 | 35.2 | 92319 | 4573 | 39989 | 89133 | 2793 | 9052 | 138 | 92 | 8 | 37 | 24 |
A. odoratissima | 174861 | 35.6 | 90169 | 4928 | 39882 | 89130 | 2793 | 9066 | 138 | 92 | 8 | 37 | 24 |
A. microsperma | 159389 | 36.5 | 88577 | 18756 | 26028 | 78030 | 2793 | 9052 | 130 | 83 | 8 | 37 | 23 |
A. ligulata | 174233 | 35.4 | 92770 | 4986 | 38225 | 88107 | 2802 | 9062 | 134 | 89 | 8 | 37 | 22 |
A. daelbata | 174217 | 35.4 | 92753 | 4956 | 38254 | 88551 | 2793 | 9060 | 137 | 91 | 8 | 37 | 22 |