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. 2019 Nov 25;39(24):e00181-19. doi: 10.1128/MCB.00181-19

TABLE 2.

Southern blot restriction digests and probe sequences

gRNA target site Restriction digestion enzyme(s) Oligonucleotide sequence (5′–3′)
Forward probe Reverse probe
Eb HindIII CTAGTCCCATCACCTAAGTCCCAG GTCAGCAAATGTTCATAGAGC
Irf4 intron KpnI GGCCTCAGTCTGTGTGGGG GAGAGCCCAGCTAGCATGGG
Irf4 5′ BamHI GCATTGTCCTACCTCCAAAGAC CTAGGTTCCTTATGACCATGG
Ifit1 intron EcoRI/BamHI GCCATTCATGAATTTCAAGAGAC GAGCCTCAGTGCCTTCTCATAG
Ifit1 3′ KpnI/EcoRI GCCATTCATGAATTTCAAGAGAC GAGCCTCAGTGCCTTCTCATAG