TABLE 2.
Mutation type | Side of immediate neighbors | Nucleotideb | Comparison | No.c |
P value |
Significanced | |
---|---|---|---|---|---|---|---|
Proportion test | Bonferroni correction | ||||||
G → A | 5′ | A | Favipiravir | 95 | 0.00054 | 0.00216 | ** |
Ribavirin | 55 | ||||||
C | Favipiravir | 28 | 0.02530 | 0.10100 | NS | ||
Ribavirin | 42 | ||||||
G | Favipiravir | 37 | 0.29800 | 1.00000 | NS | ||
Ribavirin | 42 | ||||||
U | Favipiravir | 14 | 0.38700 | 1.00000 | NS | ||
Ribavirin | 18 | ||||||
C → U | 3′ | A | Favipiravir | 43 | 0.229000 | 0.917 | NS |
Ribavirin | 57 | ||||||
C | Favipiravir | 58 | 0.260000 | 1.00000 | NS | ||
Ribavirin | 73 | ||||||
G | Favipiravir | 34 | 0.015400 | 0.0614 | NS | ||
Ribavirin | 58 | ||||||
U | Favipiravir | 96 | 0.000011 | 0.0000439 | *** | ||
Ribavirin | 54 | ||||||
C → U | 3′ | A | Favipiravir | 43 | 0.013100 | 0.05250 | NS |
No drug | 26 | ||||||
C | Favipiravir | 58 | 0.971000 | 1.00000 | NS | ||
No drug | 19 | ||||||
G | Favipiravir | 34 | 0.083900 | 0.33500 | NS | ||
No drug | 19 | ||||||
U | Favipiravir | 96 | 0.000509 | 0.00203 | ** | ||
No drug | 15 |
The viral populations analyzed are described in Fig. 3.
The nucleotide which is the 5′ or 3′ neighbor (indicated in the second column) of the mutation type given in the first column.
Number of times that the nucleotide is a neighbor to a mutation, without considering the haplotype abundance or the number of haplotypes in which a given mutation was present.
The statistical significance of the differences is given as follows: NS, not significant; **, P < 0.01; ***, P < 0.001.