Table 1. “Response to auxin stimulus” genes downregulated by WOX1 with or without CHX.

Description	Gene name	AGI code	Fold change (D/M)*1		p-value*2	q-value*3	Fold change (D/M+C)*1		ProbeName
			Mean	SE			Mean	SE
Aux/IAA	IAA16	AT3G04730	−1.47	0.06	0.000	0.019	−1.06	0.04	A_84_P23996
GH3	DFL2	AT4G03400	−1.10	0.04	0.000	0.018	−1.86	0.14	A_84_P20399
SAUR	SAUR61	AT1G29420	−4.11	0.19	0.000	0.020	−3.22	0.25	A_84_P537376
	SAUR63	AT1G29440	−4.10	0.12	0.000	0.017	−5.28	0.19	A_84_P279980
	SAUR64	AT1G29450	−3.17	0.20	0.001	0.024	−4.25	0.20	A_84_P19713
	SAUR65	AT1G29460	−3.16	0.17	0.001	0.021	−2.14	0.20	A_84_P15930
	SAUR68	AT1G29490	−3.06	0.15	0.000	0.020	−1.15	0.09	A_84_P843096
	SAUR66	AT1G29500	−1.58	0.11	0.001	0.025	−3.26	0.14	A_84_P11207
	SAUR68	AT1G29510	−1.69	0.09	0.000	0.021	−2.67	0.16	A_84_P22555
	SAUR56	AT1G76190	−1.63	0.11	0.001	0.025	−1.56	0.15	A_84_P19956
	SAUR59	AT3G60690	−1.13	0.11	0.003	0.035	−1.19	0.10	A_84_P11862
	SAUR15	AT4G38850	−3.68	0.33	0.002	0.031	−4.53	0.29	A_84_P16734
	AT5G18030		−1.28	0.13	0.004	0.037	−2.42	0.18	A_84_P152798
	SAUR22	AT5G18050	−1.28	0.16	0.006	0.046	−1.60	0.09	A_84_P141269
	SAUR23	AT5G18060	−1.39	0.10	0.001	0.026	−1.56	0.12	A_84_P94979
	SAUR24	AT5G18080	−1.48	0.09	0.001	0.024	−2.12	0.14	A_84_P272980
Others	AIR3	AT2G04160	−2.63	0.20	0.001	0.027	−2.51	0.12	A_84_P93389
	ACS4	AT2G22810	−3.11	0.31	0.003	0.035	−3.33	0.17	A_84_P17344

*¹ Means of log₂ fold changes for four experiments; D/M indicates DEX/Mock; +C indicates “with CHX”. *² p-values as assessed by a two-sided t-test. *³ False discovery rate as assessed by the Benjamini–Hochberg method.