Table 4.
Ranking of six candidate reference genes for Melipona quadrifasciata based on their expression stability according to analyses by geNorm, NormFinder, BestKeeper, and delta-Ct during development, between sexes, in tissues, and after bacterial injection and pesticide exposure.
Condition | Reference Gene | geNorm | NormFinder | BestKeeper | delta-Ct | ||||
---|---|---|---|---|---|---|---|---|---|
Stability | Rank | Stability | Rank | Stability | Rank | Stability | Stability | ||
Development | ef1-α | 1.043 | 6 | 1.74 | 6 | 0.861 | 5 | 1.80 | 6 |
gapdh | 0.665 | 5 | 1.21 | 5 | 1.321 | 6 | 1.34 | 5 | |
rpl32 | 0.257 | 1 | 0.13 | 1 | 0.774 | 3 | 0.75 | 2 | |
rps5 | 0.257 | 1 | 0.13 | 2 | 0.838 | 4 | 0.77 | 3 | |
rps18 | 0.263 | 3 | 0.13 | 3 | 0.765 | 2 | 0.73 | 1 | |
tbp-af | 0.382 | 4 | 0.35 | 4 | 0.677 | 1 | 0.87 | 4 | |
Sex | ef1-α | 0.988 | 6 | 1.66 | 6 | 1.041 | 6 | 1.70 | 6 |
gapdh | 0.629 | 5 | 0.97 | 5 | 0.759 | 5 | 1.14 | 5 | |
rpl32 | 0.145 | 1 | 0.07 | 2 | 0.696 | 3 | 0.70 | 1 | |
rps5 | 0.200 | 3 | 0.08 | 3 | 0.655 | 1 | 0.74 | 3 | |
rps18 | 0.145 | 1 | 0.07 | 1 | 0.683 | 2 | 0.70 | 2 | |
tbp-af | 0.444 | 4 | 0.70 | 4 | 0.701 | 4 | 0.94 | 4 | |
Tissues, organs and body parts | ef1-α | 0.994 | 5 | 1.05 | 4 | 4.250 | 5 | 1.29 | 4 |
gapdh | 1.164 | 6 | 1.39 | 6 | 4.580 | 6 | 1.51 | 6 | |
rpl32 | 0.426 | 1 | 0.55 | 2 | 3.253 | 3 | 0.99 | 3 | |
rps5 | 0.698 | 4 | 1.21 | 5 | 2.744 | 1 | 1.32 | 5 | |
rps18 | 0.426 | 1 | 0.56 | 3 | 3.239 | 2 | 0.98 | 2 | |
tbp-af | 0.583 | 3 | 0.33 | 1 | 3.632 | 4 | 0.89 | 1 | |
Bacterial injection | ef1-α | 0.292 | 6 | 0.46 | 6 | 0.650 | 6 | 0.48 | 6 |
gapdh | 0.197 | 5 | 0.19 | 5 | 0.638 | 5 | 0.31 | 5 | |
rpl32 | 0.094 | 3 | 0.18 | 4 | 0.465 | 2 | 0.26 | 4 | |
rps5 | 0.131 | 4 | 0.13 | 3 | 0.453 | 1 | 0.25 | 3 | |
rps18 | 0.042 | 1 | 0.13 | 2 | 0.485 | 3 | 0.22 | 1 | |
tbp-af | 0.042 | 1 | 0.12 | 1 | 0.497 | 4 | 0.23 | 2 | |
Pesticide exposure | ef1-α | 0.306 | 5 | 0.28 | 3 | 0.516 | 5 | 0.43 | 5 |
gapdh | 0.416 | 6 | 0.62 | 6 | 0.686 | 6 | 0.64 | 6 | |
rpl32 | 0.117 | 1 | 0.22 | 2 | 0.214 | 2 | 0.34 | 2 | |
rps5 | 0.140 | 3 | 0.32 | 5 | 0.237 | 3 | 0.39 | 4 | |
rps18 | 0.117 | 1 | 0.30 | 4 | 0.186 | 1 | 0.37 | 3 | |
tbp-af | 0.203 | 4 | 0.11 | 1 | 0.338 | 4 | 0.32 | 1 |