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Core genome-based phylogenetic and ANI relatedness among DAEC (A) and ETEC (B) isolates and MAGs recovered from the same sample of infectious diarrhea. Annotations in blue denote pairs of genomes (isolates and MAGs) that clustered closely in the phylogenetic reconstruction, while annotations in red denote more divergent pairs of genomes. The environmental E. coli strain TW158338 was used an outgroup.
