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. 2019 Nov 27;10:47. doi: 10.1186/s13100-019-0190-3

Table 2.

Verification of in silico results for 28 DcSto insertion sites in the carrot genome by DcS-ILP

Comparison of in silico / DcS-ILP results Accession / insertion site combinations
number %
empty / homozygous empty 541 64.4%
occupied / homozygous occupied 128 15.2%
occupied / heterozygous (empty + occupied) 94 11.2%
empty / homozygous variant of different size (‘empty’ for DcSto) 30 3.6%
empty / heterozygous (empty + variant of different size) 13 1.6%
occupied / heterozygous (occupied + variant of different size) 1 0.1%
Total correct calls 807 96.1%
 empty / heterozygous (empty + occupied) 11 1.3%
 empty / homozygous occupied 8 1.0%
 occupied / homozygous empty 1 0.1%
Total incorrect calls 20 2.4%
No amplification 13 1.5%
Total 840 100%