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. 2019 Nov 27;19:522. doi: 10.1186/s12870-019-2139-6

Table 1.

Members of the RcWRKY gene family, as predicted in R. chinensis genome sequence

Gene Accession numbera Chr.b Positionc Intron Exon CDS (bp) Amino Acids Clade
RcWRKY1 RchiOBHm_Chr1g0348121 1 40.91 4 5 894 297 I
RcWRKY2 RchiOBHm_Chr1g0357671 1 50.01 2 3 990 329 II
RcWRKY3 RchiOBHm_Chr1g0357751 1 50.05 1 2 681 226 I
RcWRKY4 RchiOBHm_Chr1g0359091 1 51.09 2 3 1053 350 III
RcWRKY5 RchiOBHm_Chr1g0372431 1 61.12 2 3 1047 348 III
RcWRKY6 RchiOBHm_Chr1g0372521 1 61.17 2 3 501 166 III
RcWRKY7 RchiOBHm_Chr1g0378621 1 65.04 2 3 1281 426 II
RcWRKY8 RchiOBHm_Chr1g0380121 1 65.88 2 3 1101 366 III
RcWRKY9 RchiOBHm_Chr2g0106361 2 17.77 2 3 945 314 II
RcWRKY10 RchiOBHm_Chr2g0117181 2 29.47 1 2 363 120 I
RcWRKY11 RchiOBHm_Chr2g0117781 2 30.1 2 3 741 246 I
RcWRKY12 RchiOBHm_Chr2g0130891 2 46.96 2 3 741 246 II
RcWRKY13 RchiOBHm_Chr2g0133001 2 49.62 4 5 975 324 II
RcWRKY14 RchiOBHm_Chr2g0151681 2 69.24 2 3 1113 370 I
RcWRKY15 RchiOBHm_Chr2g0156771 2 73.35 4 5 1431 476 I
RcWRKY16 RchiOBHm_Chr2g0166991 2 81.67 3 4 1605 534 I
RcWRKY17 RchiOBHm_Chr2g0169011 2 83.29 3 4 1473 490 II
RcWRKY18 RchiOBHm_Chr2g0175911 2 87.91 1 2 606 201 I
RcWRKY19 RchiOBHm_Chr3g0447881 3 0.39 4 5 2190 729 I
RcWRKY20 RchiOBHm_Chr3g0450591 3 2.07 2 3 945 314 II
RcWRKY21 RchiOBHm_Chr3g0460351 3 8.49 2 3 1122 373 III
RcWRKY22 RchiOBHm_Chr3g0460361 3 8.51 2 3 987 328 III
RcWRKY23 RchiOBHm_Chr3g0461481 3 9.53 4 5 1521 506 I
RcWRKY24 RchiOBHm_Chr3g0466341 3 12.8 2 3 879 292 I
RcWRKY25 RchiOBHm_Chr3g0468221 3 14.29 6 7 1437 478 I
RcWRKY26 RchiOBHm_Chr3g0485711 3 32.49 4 5 1344 447 II
RcWRKY27 RchiOBHm_Chr3g0487201 3 34.38 2 3 963 320 I
RcWRKY28 RchiOBHm_Chr4g0398741 4 15.39 2 3 918 305 II
RcWRKY29 RchiOBHm_Chr4g0425801 4 51.41 2 3 1167 388 I
RcWRKY30 RchiOBHm_Chr4g0429851 4 54.56 1 2 576 191 I
RcWRKY31 RchiOBHm_Chr4g0438661 4 61.29 3 4 969 322 I
RcWRKY32 RchiOBHm_Chr4g0439041 4 61.49 3 4 1551 516 I
RcWRKY33 RchiOBHm_Chr4g0440391 4 62.52 2 3 1668 555 II
RcWRKY34 RchiOBHm_Chr5g0002561 5 1.49 5 6 1752 583 II
RcWRKY35 RchiOBHm_Chr5g0011581 5 7.68 2 3 834 277 II
RcWRKY36 RchiOBHm_Chr5g0013131 5 8.9 2 3 1062 353 I
RcWRKY37 RchiOBHm_Chr5g0018041 5 12.58 2 3 1491 496 II
RcWRKY38 RchiOBHm_Chr5g0040801 5 35.42 5 6 1629 542 II
RcWRKY39 RchiOBHm_Chr5g0042581 5 37.45 5 6 1746 581 I
RcWRKY40 RchiOBHm_Chr5g0042601 5 37.46 2 3 381 126 I
RcWRKY41 RchiOBHm_Chr5g0071811 5 77.65 5 6 1872 623 I
RcWRKY42 RchiOBHm_Chr5g0074411 5 80.32 6 7 2151 716 I
RcWRKY43 RchiOBHm_Chr5g0083891 5 89.56 2 3 423 140 I
RcWRKY44 RchiOBHm_Chr6g0289301 6 52.4 3 4 1053 350 II
RcWRKY45 RchiOBHm_Chr6g0299481 6 60.54 1 2 918 305 II
RcWRKY46 RchiOBHm_Chr6g0299501 6 60.55 4 5 1176 391 II
RcWRKY47 RchiOBHm_Chr6g0305101 6 64.18 2 3 1020 339 II
RcWRKY48 RchiOBHm_Chr6g0308491 6 66.57 2 3 969 322 II
RcWRKY49 RchiOBHm_Chr6g0311421 6 68.36 2 3 471 156 I
RcWRKY50 RchiOBHm_Chr7g0189781 7 9.05 1 2 501 166 I
RcWRKY51 RchiOBHm_Chr7g0195191 7 13.12 2 3 1080 359 III
RcWRKY52 RchiOBHm_Chr7g0196571 7 14.58 1 2 672 223 II
RcWRKY53 RchiOBHm_Chr7g0202671 7 20.25 2 3 879 292 II
RcWRKY54 RchiOBHm_Chr7g0223361 7 45.05 3 4 1374 457 II
RcWRKY55 RchiOBHm_Chr7g0241021 7 67 2 3 831 276 II
RcWRKY56 RchiOBHm_Chr7g0241041 7 67.01 4 5 429 142 II

aAvailable at https://lipm-browsers.toulouse.inra.fr/pub/RchiOBHm-V2/

bChromosome

cStarting position (Mb)