Table 1.
Gene | Accession numbera | Chr.b | Positionc | Intron | Exon | CDS (bp) | Amino Acids | Clade |
---|---|---|---|---|---|---|---|---|
RcWRKY1 | RchiOBHm_Chr1g0348121 | 1 | 40.91 | 4 | 5 | 894 | 297 | I |
RcWRKY2 | RchiOBHm_Chr1g0357671 | 1 | 50.01 | 2 | 3 | 990 | 329 | II |
RcWRKY3 | RchiOBHm_Chr1g0357751 | 1 | 50.05 | 1 | 2 | 681 | 226 | I |
RcWRKY4 | RchiOBHm_Chr1g0359091 | 1 | 51.09 | 2 | 3 | 1053 | 350 | III |
RcWRKY5 | RchiOBHm_Chr1g0372431 | 1 | 61.12 | 2 | 3 | 1047 | 348 | III |
RcWRKY6 | RchiOBHm_Chr1g0372521 | 1 | 61.17 | 2 | 3 | 501 | 166 | III |
RcWRKY7 | RchiOBHm_Chr1g0378621 | 1 | 65.04 | 2 | 3 | 1281 | 426 | II |
RcWRKY8 | RchiOBHm_Chr1g0380121 | 1 | 65.88 | 2 | 3 | 1101 | 366 | III |
RcWRKY9 | RchiOBHm_Chr2g0106361 | 2 | 17.77 | 2 | 3 | 945 | 314 | II |
RcWRKY10 | RchiOBHm_Chr2g0117181 | 2 | 29.47 | 1 | 2 | 363 | 120 | I |
RcWRKY11 | RchiOBHm_Chr2g0117781 | 2 | 30.1 | 2 | 3 | 741 | 246 | I |
RcWRKY12 | RchiOBHm_Chr2g0130891 | 2 | 46.96 | 2 | 3 | 741 | 246 | II |
RcWRKY13 | RchiOBHm_Chr2g0133001 | 2 | 49.62 | 4 | 5 | 975 | 324 | II |
RcWRKY14 | RchiOBHm_Chr2g0151681 | 2 | 69.24 | 2 | 3 | 1113 | 370 | I |
RcWRKY15 | RchiOBHm_Chr2g0156771 | 2 | 73.35 | 4 | 5 | 1431 | 476 | I |
RcWRKY16 | RchiOBHm_Chr2g0166991 | 2 | 81.67 | 3 | 4 | 1605 | 534 | I |
RcWRKY17 | RchiOBHm_Chr2g0169011 | 2 | 83.29 | 3 | 4 | 1473 | 490 | II |
RcWRKY18 | RchiOBHm_Chr2g0175911 | 2 | 87.91 | 1 | 2 | 606 | 201 | I |
RcWRKY19 | RchiOBHm_Chr3g0447881 | 3 | 0.39 | 4 | 5 | 2190 | 729 | I |
RcWRKY20 | RchiOBHm_Chr3g0450591 | 3 | 2.07 | 2 | 3 | 945 | 314 | II |
RcWRKY21 | RchiOBHm_Chr3g0460351 | 3 | 8.49 | 2 | 3 | 1122 | 373 | III |
RcWRKY22 | RchiOBHm_Chr3g0460361 | 3 | 8.51 | 2 | 3 | 987 | 328 | III |
RcWRKY23 | RchiOBHm_Chr3g0461481 | 3 | 9.53 | 4 | 5 | 1521 | 506 | I |
RcWRKY24 | RchiOBHm_Chr3g0466341 | 3 | 12.8 | 2 | 3 | 879 | 292 | I |
RcWRKY25 | RchiOBHm_Chr3g0468221 | 3 | 14.29 | 6 | 7 | 1437 | 478 | I |
RcWRKY26 | RchiOBHm_Chr3g0485711 | 3 | 32.49 | 4 | 5 | 1344 | 447 | II |
RcWRKY27 | RchiOBHm_Chr3g0487201 | 3 | 34.38 | 2 | 3 | 963 | 320 | I |
RcWRKY28 | RchiOBHm_Chr4g0398741 | 4 | 15.39 | 2 | 3 | 918 | 305 | II |
RcWRKY29 | RchiOBHm_Chr4g0425801 | 4 | 51.41 | 2 | 3 | 1167 | 388 | I |
RcWRKY30 | RchiOBHm_Chr4g0429851 | 4 | 54.56 | 1 | 2 | 576 | 191 | I |
RcWRKY31 | RchiOBHm_Chr4g0438661 | 4 | 61.29 | 3 | 4 | 969 | 322 | I |
RcWRKY32 | RchiOBHm_Chr4g0439041 | 4 | 61.49 | 3 | 4 | 1551 | 516 | I |
RcWRKY33 | RchiOBHm_Chr4g0440391 | 4 | 62.52 | 2 | 3 | 1668 | 555 | II |
RcWRKY34 | RchiOBHm_Chr5g0002561 | 5 | 1.49 | 5 | 6 | 1752 | 583 | II |
RcWRKY35 | RchiOBHm_Chr5g0011581 | 5 | 7.68 | 2 | 3 | 834 | 277 | II |
RcWRKY36 | RchiOBHm_Chr5g0013131 | 5 | 8.9 | 2 | 3 | 1062 | 353 | I |
RcWRKY37 | RchiOBHm_Chr5g0018041 | 5 | 12.58 | 2 | 3 | 1491 | 496 | II |
RcWRKY38 | RchiOBHm_Chr5g0040801 | 5 | 35.42 | 5 | 6 | 1629 | 542 | II |
RcWRKY39 | RchiOBHm_Chr5g0042581 | 5 | 37.45 | 5 | 6 | 1746 | 581 | I |
RcWRKY40 | RchiOBHm_Chr5g0042601 | 5 | 37.46 | 2 | 3 | 381 | 126 | I |
RcWRKY41 | RchiOBHm_Chr5g0071811 | 5 | 77.65 | 5 | 6 | 1872 | 623 | I |
RcWRKY42 | RchiOBHm_Chr5g0074411 | 5 | 80.32 | 6 | 7 | 2151 | 716 | I |
RcWRKY43 | RchiOBHm_Chr5g0083891 | 5 | 89.56 | 2 | 3 | 423 | 140 | I |
RcWRKY44 | RchiOBHm_Chr6g0289301 | 6 | 52.4 | 3 | 4 | 1053 | 350 | II |
RcWRKY45 | RchiOBHm_Chr6g0299481 | 6 | 60.54 | 1 | 2 | 918 | 305 | II |
RcWRKY46 | RchiOBHm_Chr6g0299501 | 6 | 60.55 | 4 | 5 | 1176 | 391 | II |
RcWRKY47 | RchiOBHm_Chr6g0305101 | 6 | 64.18 | 2 | 3 | 1020 | 339 | II |
RcWRKY48 | RchiOBHm_Chr6g0308491 | 6 | 66.57 | 2 | 3 | 969 | 322 | II |
RcWRKY49 | RchiOBHm_Chr6g0311421 | 6 | 68.36 | 2 | 3 | 471 | 156 | I |
RcWRKY50 | RchiOBHm_Chr7g0189781 | 7 | 9.05 | 1 | 2 | 501 | 166 | I |
RcWRKY51 | RchiOBHm_Chr7g0195191 | 7 | 13.12 | 2 | 3 | 1080 | 359 | III |
RcWRKY52 | RchiOBHm_Chr7g0196571 | 7 | 14.58 | 1 | 2 | 672 | 223 | II |
RcWRKY53 | RchiOBHm_Chr7g0202671 | 7 | 20.25 | 2 | 3 | 879 | 292 | II |
RcWRKY54 | RchiOBHm_Chr7g0223361 | 7 | 45.05 | 3 | 4 | 1374 | 457 | II |
RcWRKY55 | RchiOBHm_Chr7g0241021 | 7 | 67 | 2 | 3 | 831 | 276 | II |
RcWRKY56 | RchiOBHm_Chr7g0241041 | 7 | 67.01 | 4 | 5 | 429 | 142 | II |
aAvailable at https://lipm-browsers.toulouse.inra.fr/pub/RchiOBHm-V2/
bChromosome
cStarting position (Mb)