Table 1. Characteristic features of the binturong mitogenome (H denotes Heavy Strand; L denotes Light Strand).
Gene | Strand | Start | End | Size (bp) | Start codon | Stop codon | Base composition (%) | AT SKEW | GC SKEW | |
---|---|---|---|---|---|---|---|---|---|---|
(A+T)% | (G+C)% | |||||||||
tRNAFPhe | H | 1 | 69 | 68 | – | – | 60 | 39 | 0.26 | −0.02 |
12S rRNA | H | 70 | 1,034 | 964 | – | – | 59 | 39 | 0.25 | −0.17 |
tRNAVTyr | H | 1,035 | 1,103 | 68 | – | – | 59 | 39 | 0.22 | −0.28 |
16S rRNA | H | 1,104 | 2,678 | 1,574 | – | – | 62 | 37 | 0.19 | −0.08 |
tRNAL2 | H | 2,679 | 2,754 | 75 | – | – | 58 | 40 | 0 | −0.1 |
nad1 | H | 2,755 | 3,697 | 942 | ATG | AGA | 60 | 38 | 0 | −0.4 |
tRNAIAsp | H | 3,698 | 3,767 | 69 | – | – | 72 | 26 | 0.08 | 0.15 |
tRNAQLeu | L | 3,768 | 3,841 | 73 | – | – | 66 | 32 | 0.09 | −0.4 |
tRNAMHis | H | 3,842 | 3,911 | 69 | – | – | 55 | 42 | 0.01 | −0.25 |
nad2 | H | 3,912 | 4,944 | 1,032 | ATT | AGA | 65 | 33 | 0.13 | −0.51 |
tRNAWSer | H | 4,945 | 5,015 | 70 | – | – | 57 | 41 | 0.12 | −0.17 |
tRNAACys | L | 5,016 | 5,085 | 69 | – | – | 64 | 34 | 0.15 | −0.35 |
tRNANVal | L | 5,086 | 5,159 | 73 | – | – | 60 | 39 | 0 | −0.2 |
tRNACAla | L | 5,160 | 5,228 | 68 | – | – | 56 | 42 | −0.07 | −0.19 |
tRNAYVal | L | 5,229 | 5,297 | 68 | – | – | 60 | 74 | 0 | 0.4 |
cox1 | H | 5,298 | 6,831 | 1,533 | ATG | TAA | 62 | 36 | −0.1 | −0.11 |
tRNAS2 | L | 6,832 | 6,901 | 69 | – | – | 63 | 35 | 0.17 | −0.2 |
tRNADVal | H | 6,902 | 6,971 | 69 | – | – | 70 | 28 | −0.05 | 0.2 |
cox2 | H | 6,972 | 7,653 | 681 | ATG | TAA | 64 | 34 | 0.03 | −0.2 |
tRNAKPhe | H | 7,654 | 7,722 | 68 | – | – | 72 | 26 | 0.08 | 0 |
atp8 | H | 7,723 | 7,921 | 198 | ATG | TAA | 71 | 27 | 0.12 | −0.5 |
atp6 | H | 7,922 | 8,597 | 675 | ATG | TAA | 63 | 34 | −0.01 | −0.5 |
cox3 | H | 8,598 | 9,381 | 783 | ATG | TAG | 61 | 37 | −0.04 | −0.4 |
tRNAGSer | H | 9,382 | 9,452 | 70 | – | – | 65 | 33 | 0.04 | −0.09 |
nad3 | H | 9,453 | 9,798 | 345 | ATA | TA | 64 | 34 | 0 | −0.35 |
tRNARSer | H | 9,799 | 9,868 | 69 | – | – | 77 | 21 | 0.14 | −0.04 |
nad4l | H | 9,869 | 10,163 | 294 | ATG | TAA | 64 | 33 | −0.09 | −0.33 |
nad4 | H | 10,164 | 11,532 | 1,368 | ATG | TA | 64 | 34 | 0.03 | −0.41 |
tRNAHVal | H | 11,533 | 11,602 | 69 | – | – | 76 | 22 | 0.02 | 0s |
tRNAS1Ala | H | 11,603 | 11,662 | 59 | – | – | 65 | 33 | 0.07 | −0.09 |
tRNALSer | H | 11,663 | 11,733 | 70 | – | – | 68 | 31 | 0.2 | 0.09 |
nad5 | H | 11,734 | 13,540 | 1,806 | ATT | TAA | 65 | 34 | 0.01 | −0.4 |
nad6 | L | 13,541 | 14,063 | 522 | ATG | TAA | 62 | 35 | 0.32 | −0.4 |
tRNAEPhe | L | 14,064 | 14,133 | 69 | – | – | 69 | 29 | 0.13 | −0.24 |
Cob | H | 14,134 | 15,268 | 1,134 | ATG | AGA | 60 | 38 | 0 | −0.31 |
tRNATCys | H | 15,269 | 15,340 | 71 | – | – | 63 | 34 | 0.04 | −0.11 |
tRNAPTrp | L | 15,341 | 15,407 | 66 | – | – | 55 | 43 | 0.23 | −0.39 |
Control region | H | 15,408 | 16,642 | 1,234 | – | – | 61 | 37 | 0.01 | −0.29 |