Table 1.
Summary statistics for GIAB sequencing data.
| No. of reads (millions) | Mean read length (bp) | Mean insert size (bp) | Mean coverage | %hets phased | |
|---|---|---|---|---|---|
| Solid5500W | 22.13 | 68 | NA | 22 | 9.8 |
| Complete Genomics | 132.6 | 33 | 282 | 77 | 35.1 |
| Illumina HiSeq | 13.29 | 148 | 546 | 33 | 57.9 |
| PacBio | 1.04 | 3707 | 2048 | 42 | 90.1 |
| 10x Genomics | 22.27 | 88 | 194 | 33 | 97.7 |
For each type of sequencing data available for GIAB is given the total number of reads in millions, the mean length of the reads in base pairs, the mean insert size in base pairs, the means coverage, and the percentage of heterozygous genotypes belonging to phase sets