Fig. 4.

Molecular dynamics simulations of triangular DNA origami objects. a Two DX- and 6HB-based DNA origami triangular objects are simulated using all-atom molecular dynamics. b The average internal angle, θ, of triangular objects varies with edge base-pair length (42- and 84-bp) and edge-type (DX and 6HB edges). c The average out-of-plane angle, ω, of the DNA origami triangular objects. d Total RMSD of all nucleic acid atoms based on the ground-state atomic model generated by METIS. e All-atom RMSFs are calculated for the 42- and 84-bp DX- and 6HB-based triangular objects and mapped as a white-to-red color gradient. Source Data are available in the Source Data file.