Table 1.

Total number of sequenced reads and the mapping percentage of 24 libraries sequenced using Illumina HiSeq 3000

Library name	Total no. of sequenced reads	No. of mapped reads	Percent mapped reads
PA99N82–4_48 hpi_Rep1	36,006,390	28,658,249	79.70%
PA99N82–4_48 hpi_Rep2	32,535,083	23,590,096	72.68%
PA99N82–4_48 hpi_Rep3	32,015,587	24,903,593	77.87%
PA99N82–4_7 dpi_Rep1	29,687,468	20,689,188	69.78%
PA99N82–4_7 dpi_Rep2	32,428,022	18,773,826	57.79%
PA99N82–4_7 dpi_Rep3	38,735,092	24,514,654	63.30%
PA99N82–4_14 dpi_Rep1	35,725,073	26,963,309	75.50%
PA99N82–4_14 dpi_Rep2	37,050,174	27,659,207	74.74%
PA99N82–4_14 dpi_Rep3	33,921,088	28,152,554	83.10%
PA99N82–4_21 dpi_Rep1	34,488,511	29,721,424	86.29%
PA99N82–4_21 dpi_Rep2	35,811,762	29,629,073	82.84%
PA99N82–4_21 dpi_Rep3	34,541,968	28,757,700	83.36%
Russet Burbank_48 hpi_Rep1	37,167,700	30,221,101	81.41%
Russet Burbank_48 hpi_Rep2	33,674,984	26,881,866	79.92%
Russet Burbank_48 hpi_Rep3	37,027,642	30,005,844	81.14%
Russet Burbank_7 dpi_Rep1	32,641,052	23,764,692	72.84%
Russet Burbank_7 dpi_Rep2	28,964,657	23,553,284	81.41%
Russet Burbank_7 dpi_Rep3	28,367,927	21,524,660	75.98%
Russet Burbank_14 dpi_Rep1	38,250,425	32,461,405	84.99%
Russet Burbank_14 dpi_Rep2	36,979,817	32,044,476	86.76%
Russet Burbank_14 dpi_Rep3	33,964,944	27,090,704	79.85%
Russet Burbank_21 dpi_Rep1	27,859,614	24,711,828	88.81%
Russet Burbank_21 dpi_Rep2	33,289,516	28,329,367	85.20%
Russet Burbank_21 dpi_Rep3	33,375,813	28,370,660	85.10%