Table 2.

Distribution summary of all the differentially expressed genes (DEGs) across nematode resistant clone PA99N82–4 versus nematode susceptible clone Russet Burbank. Three biological replicates of the clones were used at each time point for RNAseq

Libraries compared (3 Replicates each)	Total no. of DEGs	No. of DEGs up-regulated in PA99N82–4	No. of DEGs up-regulated in PA99N82–4 with Fold change ≥1	No. of DEGs expressed only in PA99N82–4
PA99N82–4_48 hpi versus Russet Burbank_48 hpi	2973	1268	831	24
PA99N82–4_7 dpi versus Russet Burbank_7 dpi	2826	1261	894	25
PA99N82–4_14 dpi versus Russet Burbank_14 dpi	2166	1102	687	23
PA99N82–4_21 dpi versus Russet Burbank_21 dpi	5282	2753	1416	33