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. 2019 Nov 29;9:18017. doi: 10.1038/s41598-019-54353-1

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© The Author(s) 2019

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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RDA triplot showing the associations between the faecal microbiota composition and environmental variables on day 30. Triangles represent different experimental groups, red arrows numerical environmental variables and blue arrows the 4 best fitting bacterial genera on d30. The plotted first and second ordination axes explain 12% and 6% of the variability in the dataset. Samples are coloured by treatment CTRL = placebo control; NV = non-vaccinated; V = vaccinated; lcITF = long-chain inulin type fructans; LaW37 = L. acidophilus W37.