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. Author manuscript; available in PMC: 2020 May 18.
Published in final edited form as: Nat Genet. 2019 Nov 18;51(12):1670–1678. doi: 10.1038/s41588-019-0512-x

Table 1 ∣.

Genome-wide significant loci in the East Asian populations.

Stage 1 Stage 2 Combined
SNP Chr BP AL P OR P OR P OR
rs4660761 1 44440146 A/G 3.6E-06 0.91 3.53E-04 0.92 5.08E-09 0.91
rs848293 2 58382490 A/G 3.7E-10 0.90 3.10E-09 0.87 9.87E-18 0.89
rs17592552 2 201176071 T/C 8.4E-10 0.86 2.68E-05 0.89 1.50E-13 0.88
rs2073499 3 50374293 A/G 1.1E-09 0.89 2.14E-05 0.91 1.33E-13 0.90
rs76442143 3 51043599 T/C 6.9E-09 1.14 1.03E-02 1.08 6.40E-10 1.12
rs10935182 3 136137422 A/G 1.3E-06 0.90 1.33E-04 0.90 7.08E-10 0.90
rs4856763 3 161831675 A/G 3.9E-06 0.92 8.54E-06 0.91 1.73E-10 0.92
rs13096176 3 180752138 T/C 3.1E-07 0.88 2.21E-03 0.90 3.35E-09 0.89
rs6832165 4 24270210 C/G 3.7E-08 1.12 3.70E-01 1.08 2.79E-08 1.12
rs13142920 4 176728614 A/C 9.5E-05 0.93 5.85E-06 0.89 4.85E-09 0.92
rs4479913 6 165075210 A/G 3.6E-07 1.13 9.98E-05 1.12 1.53E-10 1.12
rs320696 7 137047137 A/C 5.5E-08 0.90 1.07E-02 0.93 2.81E-09 0.91
rs11986274 8 38259481 T/C 5.1E-04 1.07 2.73E-06 1.11 1.44E-08 1.08
rs2612614 8 65310836 A/G 2.2E-08 1.14 4.51E-02 1.06 1.62E-08 1.11
rs4147157 10 104536360 A/G 6.6E-10 0.90 3.87E-07 0.89 1.32E-15 0.89
rs10861879 12 108609634 A/G 4.8E-07 1.09 5.00E-03 1.07 1.18E-08 1.08
rs1984658 12 123483426 A/G 5.1E-11 0.89 2.14E-04 0.92 8.62E-14 0.90
rs9567393 13 32763757 A/G 3.5E-08 1.11 4.37E-03 1.07 1.13E-09 1.09
rs9890128 17 1273646 T/C 3.5E-08 0.90 2.44E-02 0.91 2.61E-09 0.90
rs11665111 18 77622996 T/C 5.2E-06 1.08 6.89E-04 1.09 1.46E-08 1.09
rs55642704 18 77688124 T/C 1.1E-06 1.09 7.11E-06 1.10 3.76E-11 1.09

BP, genomic position in HG19; AL, reference and non-reference alleles; OR, odds ratio; P, P-value. n (EAS stage 1) = 13,305 cases, 16,244 controls; n (EAS stage 1+2) = 22,778 cases, 35,362 controls. Fixed effect inverse variance meta-analysis was utilized to generate P-values.