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. 2019 Oct 11;36(11):2237–2244. doi: 10.1007/s10815-019-01573-z

Table 1.

Primers and restriction enzymes used to detect miR-146a C > G, miR-149 T > C, miR-196a2 T > C, and miR-499 A > G polymorphisms

Polymorphism Sequence 5′ to 3′ Annealing temperature (°C) PCR product (bp) Restriction enzyme Wild type Heterozygote Mutant
miR-146a C > G

F 5′-CATGGGTTGTGTCAGTGTCAGAGC-3′

R 5′-TGCCTTCTGTCTCCAGTCTTCCA-3′

62 147 SacI 147 147/122/25 122/25
miR-149 T > C

F 5′-TGTCTTCACTCCCGTGCTTGTCC-3′

R 5′-TGAGGCCCGAAACACCCGTA-3′

65 254 PvuII 254 254/194/60 194/60
miR-196a2 T > C

F 5′-CCCCTTCCCTTCTCCTCCAGATA-3′

R 5′-CGAAAACCGACTGATGTAACTCCG-3′

63 149 MspI 149 149/125/24 125/24
miR-499 A > G

F 5′-CAAAGTCTTCACTTCCCTGCC-3′

R 5′-ATGTTTAACTCCTCTCCACGTGATC-3′

65 145 BclI 145 145/120/25 120/25