Table 1.
Structural comparison using the Dali server
PDB code | PL family | Z score | RMSD | LALIa | Identity | Function |
---|---|---|---|---|---|---|
Å | % | |||||
3AFL | PL15 | 27 | 3.6 | 587 | 14 | Alginate lyase |
4OJZ | PL17 | 25.9 | 3.3 | 572 | 16 | Alginate lyase |
4FNV | PL12 | 24.9 | 4.4 | 494 | 15 | Heparinase III |
2FUQ | PL21 | 24.2 | 4.6 | 588 | 16 | Heparinase II |
4E1Y | PL5 | 21 | 3.2 | 288 | 13 | Alginate lyase |
6F2P | PL8 | 14.9 | 6.3 | 570 | 6 | Xanthan lyase |
a Total number of the equivalenced residues is shown.