Table II. Predictive performance of NNAlign_MA and NetBoLApan on the set of known CD8 epitopes.
| Allele | Epitope | Antigen | Npep | NetBoLApan | NNAlign_MA | |
|---|---|---|---|---|---|---|
| T. parva | BoLA-6*01301 | VGYPKVKEEML | Tp1 | 2138 | 0.0098 | 0.0070 |
| BoLA-6*04101 | EELKKLGML | Tp2 | 662 | 0.0000 | 0.0000 | |
| BoLA-2*01201 | SSHGMGKVGK | Tp2 | 662 | 0.0060 | 0.0045 | |
| BoLA-T2c | FAQSLVCVL | Tp2 | 662 | 0.0136 | 0.0151 | |
| BoLA-2*01201 | QSLVCVLMK | Tp2 | 662 | 0.0015 | 0.0015 | |
| BoLA-AW10 | TGASIQTTL | Tp4 | 2282 | 0.0000 | 0.0000 | |
| BoLA-1*00902 | SKADVIAKY | Tp5 | 586 | 0.0000 | 0.0000 | |
| BoLA-T7 | FISFPISL | Tp7 | 2850 | 0.0172 | 0.0112 | |
| BoLA-3*00101 | CGAELNHFL | Tp8 | 1726 | 0.0029 | 0.0035 | |
| BoLA-1*02301 | AKFPGMKKS | Tp9 | 1302 | 0.0054 | 0.0023 | |
| BHV | BoLA-1:00901 | FVEGEAASH | ICP4 | 5350 | 0.1215 | 0.0000 |
| BoLA-3:00201 | AGPDLQLARL | ICP4 | 5350 | 0.0000 | 0.0000 | |
| BoLA-3:00201 | TTPEILIEL | Circ | 1006 | 0.0000 | 0.0000 | |
| BoLA-3:01701 | TGARAGYAA | ICP4 | 5350 | 0.0350 | 0.0013 | |
| BoLA-4:02401 | GAFCPEDW | ICP22 | 1214 | 0.0066 | 0.0058 | |
| BoLA-2:01801 | APAPSPGAL | Circ | 978 | 0.0020 | 0.0000 | |
| Average | 0.0138 | 0.0033 |