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. 2019 Dec 2;20(Suppl 16):585. doi: 10.1186/s12859-019-3073-1

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© The Author(s). 2019

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 4 — Syntenic dotplots comparing E. coli strains across time points and between the intestine and the bloodstream. Regions of sequence identity are marked by colored lines. A Sample A draft genome (x-axis) compared to sample D draft genome (y-axis). B Bloodstream isolate genome (x-axis) compared to sample C draft genome (y-axis). The near-perfect correspondence reveals that the bloodstream isolate is concordant with and thus likely originated from the intestinal microbiome