Table 1.

Summary of sequencing reads after filtering and genome mapping.

Sample	Total Clean Reads (Mb)	Total Clean Bases (Gb)	Clean Reads Q30 (%)	Total Mapping Ratio
CK-L-1	44.93	6.74	95.03	60.59%
CK-L-2	44.07	6.61	96.06	64.09%
CK-L-3	45	6.75	95.94	64.47%
CK-R-1	44.27	6.64	95.34	62.21%
CK-R-2	44.42	6.66	95.81	59.86%
CK-R-3	44.06	6.61	95.94	60.16%
D-L-1	44.73	6.71	95.02	63.08%
D-L-2	45.13	6.77	95.1	63.50%
D-L-3	44.8	6.72	95.1	63.80%
D-R-1	44.97	6.74	95.4	60.51%
D-R-2	44.71	6.71	95.06	61.52%
D-R-3	41.5	6.23	95	62.03%
S-L-1	42.78	6.42	95.18	63.53%
S-L-2	44.42	6.66	95.18	62.31%
S-L-3	44.99	6.75	95.2	61.65%
S-R-1	44.9	6.73	95.25	61.69%
S-R-2	44.91	6.74	95.63	61.21%
S-R-3	42.11	6.32	95.09	60.84%
Total number of novel transcripts			42,251
Coding transcripts			35,124
Noncoding transcripts			7127
Novel genes			4251

Q30 indicates a quality score of 30, a 0.1% chance of error, and 99.9% confidence.