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. 2019 Nov 11;20(22):5644. doi: 10.3390/ijms20225644

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© 2019 by the authors.

Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).

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Structural/conformational changes of UPF1 protein when complexed with UPF2 or AMPPNP. (A) Wild-type and mutant UPF1 protein in complex with AMPPNP or UPF2. (B) Area analysis of structural changes in the ATP-binding region of the UPF1 protein, triangle selected for area calculation was based on Cα atoms coordinates of T499, E637, and E833 residues. The dark lines represent the trend with a moving average of area with a period of 10 ns. Different domains of UPF1 are colored as per Figure 1.