Table 3.
The number of differentially expressed miRNAs in each comparison.
| DE Set | Total DE miRNA | Upregulated | Downregulated |
|---|---|---|---|
| W1C_1_W1C_2_W1C_3 vs W1N_1_W1N_2_W1N_3 | 11 | 9 | 2 |
| H1C_1_H1C_2_H1C_3 vs H1N_1_H1N_2_H1N_3 | 7 | 2 | 5 |
| W5C_1_W5C_2_W5C_3 vs W5N_1_W5N_2_W5N_3 | 3 | 3 | 0 |
| H5C_1_H5C_2_H5C_3 vs H5N_1_H5N_2_H5N_3 | 3 | 3 | 0 |
| W1N_1_W1N_2_W1N_3 vs W5N_1_W5N_2_W5N_3 | 11 | 3 | 8 |
| H1N_1_H1N_2_H1N_3 vs H5N_1_H5N_2_H5N_3 | 9 | 6 | 3 |
| W1N_1_W1N_2_W1N_3 vs H1N_1_H1N_2_H1N_3 | 10 | 3 | 7 |
| W5N_1_W5N_2_W5N_3 vs H5N_1_H5N_2_H5N_3 | 9 | 0 | 9 |
miRNA differential expression analysis was conducted by DESeq2 (1.10.1), miRNA with |log2(FC)| ≥ 1.00; FDR (False Discovery Rate) ≤ 0.01 found by DESeq2 were assigned as differentially expressed.