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. Author manuscript; available in PMC: 2021 Jan 1.
Published in final edited form as: Epidemiology. 2020 Jan;31(1):126–133. doi: 10.1097/EDE.0000000000001101

TABLE 1.

Constituent learner functions considered and selected for use in the final Super Learner ensemble

Family Available functions Description Functions selected for further consideration and inclusion in final SuperLearner ensemble
Boosting gbm Gradient boosting model gbm
LASSO biglasso LASSO biglasso
Elastic net glmnet at alpha levels 0.1 – 0.9 (in 0.1 increments) Elastic net regularized logistic regression model with varying levels of the mixing parameters between LASSO (alpha = 1) and ridge (alpha = 0) glmnet, alpha = 0.5
glmnet, alpha = 0.8
glmnet, alpha = 0.9
K-nearest neighbor knn K-nearest neighbors knn
kernelKnn Kernel-based K-nearest neighbors
Decision trees / regression trees cforest Conditional random forests Cforest randomForest
dbarts Discrete Bayesian additive regression trees samples
extraTrees Extremely randomized trees
ipredbagg Bagging for classification, regression and survival trees
randomForest Random forest
ranger Fast implementation of random Forests / recursive partitioning
rpart Recursive partitioning and regression trees
rpartPrune Recursive partitioning and regression trees with pruning
Support vector machine svm Support vector machines ksvm
ksvm Kernel-based support vector machines