Table 1.
Analysis of cell volumes and respective cited literature provided in Lynch and Marinov [1]
| Species | Volume (μm3) | Reference(s) cited | Location in cited reference1,2 | Comments |
|---|---|---|---|---|
| Bacillus subtillis | 1.407 | Barrera and Pan [14] | not present | The value reported is a range: 0.85-1.13 μm3 (p. S18, Table S-3, col. 4-5, rows 3-5). |
| Maass et al. [15] | not present | |||
| Escherichia coli | 0.983 | Bremer and Dennis [16] | not present | |
| Fegatella et al. [17] | not present | The value reported is 1.1 μm3 (p. 4434, col. 2, l. 30). | ||
| Bakshi et al. [18] | not present | The value reported is a range from 1.3-2.4 μm3 (p. S12, Fig S6). | ||
| Arfvidsson and Wahlund [19] | not present | |||
| Wisniewski et al. [20] | not present | |||
| Lu et al. [21] | not present | |||
| Legionella pneumophila | 0.58 | Leskelä et al. [22] | not present | |
| Leptospira interrogans | 0.22 | Beck et al. [23] | p. S10, col 1, l. 8 | |
| Schmidt et al. [24] | not present | |||
| Mycoplasma pneumoniae | 0.05 | Yus et al. [25] | not present | The value in Maier et al. is from Hasselbring [29]. Still not plotted at 0.05 μm3 in Figure 2. |
| Seybert et al. [26] | not present | |||
| Kühner et al. [27] | not present | |||
| Maier et al. [28] | p. S3, col. 1, l. 5 | |||
| Mycobacterium tuberculosis | 0.215 | Yamada et al. [30] | not present | |
| Rickettsia prowazekii | 0.089 | Pang and Winkler [31] | not present | The value reported is close but not the same: 0.09 μm3 (p. 117, Table 2, comment e.). |
| Sphingopyxis alaskensis | 0.05 | Fegatella et al. [17] | p. 4434, col. 2, l. 29 | |
| Spiroplasma melliferum | 0.018 | Ortiz et al. [32] | incorrect | L&M take the volume for a portion of the cell (p.339, col .1, l. 10). The volume reported for the whole cell is 34 times larger (p.339, col. 2, l. 16-18). |
| Staphylococcus aureus | 0.288 | Martin and Iandolo [33] | not present | |
| Vibrio angustum | no value | Flärdh et al. [34] | ||
| ARMAN* | 0.03 | Comolli et al. [35] | p. 162, col. 2, l. 41 | |
| Exophiala dermatitidis* | 43.8 | Biswas et al. [36] | p. 137, Table 2, col. 7, row 2, 4 | L&M add the reported mean numbers for cell (36.0 ± 12.6 μm3) and cell wall (7.8 ± 2.5 μm3). |
| Saccharomyces cerevisiae | 69.071 | Warner [37] | not present | The reported values are 17.1 μm3 for a cell in G1 and 13.3 μm3 for a cell in the early G1 (p.326, Table 2, l. 3). |
| Yamaguchi et al [38] | not present | |||
| Kulak et al. [39] | not present | |||
| Ghaemmaghami et al. [40] | not present | |||
| Schizosaccharomyces pombe | 118 | Marguerat et al. [41] | not present | The reported values are: cell length of 5-15 μm and cell diameter of 3.5 μm. p.322, col. 2, l. 24. |
| Maclean [42] | not present | |||
| Kulak [39] | not present | |||
| Tetrahymena pyriformis | 14002.067 | Hallberg and Bruns [5] | not present | |
| Tetrahymena thermophila | 7856.00 | Calzone et al. [43] | not present | |
| Chlamydomonas reinhardtii | 151.00 | Bourque et al. [44] | not present | |
| Ostreococcus tauri* | 0.910 | Henderson et al. [45] | p. 3, col. 1, l. 7 | |
| Adonis aestivalis (vegetative) | 2380.3 | Lin and Gifford [46] | p. 2481, Table 2, col. 3, row 3-5 | L&M take the mean value for the vegetative apex of the central zone (2877), peripheral zone (924) and rib meristem (3340). |
| Adonis aestivalis (transitional) | 2287.00 | Lin and Gifford [46] | p. 2481, Table 2, col. 3, row 6-8 | L&M take the mean value for the vegetative apex of the transitional zone (1721), peripheral zone (1095) and rib meristem (4045). |
| Adonis aestivalis | 2690.00 | Lin and Gifford [46] | p. 2481, Table 2 col. 3, row 9-11 | L&M take the mean value for the vegetative apex of the floral zone (2380), peripheral zone (802) and rib meristem (4888). |
| Glycine max SB-1 cell | no value | Jackson and Lark [47] | ||
| Rhus toxicodendron* | 1222.00 | Vassilyev [48] | p.617, Table 2, col 2-3, row 1 | L&M take the mean value of the whole cell for procambial stage (1028), rough ER stage (1130) and smooth ER stage (1508). |
| Zea mays root cell | 240,000 | Hsiao [49] | not present | The value appears in the literature but not in Hsiao [49], but rather in Hsiao [50] p.105, Table 1, col. 3, row 4-5. |
| Hamster, intestinal enterocyte* | 1890.00 | Buschmann and Manke [51, 52] | p. 16, Table 1, col. 2, row 6 | In Buschmann and Manke [52]. |
| HeLa Cell | 2798.668 | Duncan and Hershey [53] | not present | The reported value is 2600 μm3. p.163, col. 2, l. 35. |
| Zhao et al. [54] | not present | |||
| Kulak et al. [39] | not present | |||
| Mouse pancreas* | 1434.00 | Dean [55] | p. 117, Table 2, col. 6, row 2 | |
| Rat liver cell* | 4940.00 | Weibel et al. [56] | p. 80, Table 2, col. 10, row 2 |
1‘S’ refers to Supplemental Material
2not present - value cannot be found in the cited paper; incorrect - a wrong value was taken from the cited paper
*Species with both volume and ribosome count values verified