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. 2019 Dec 3;19:348. doi: 10.1186/s12906-019-2759-2

Table 6.

Pi-Pi bonds (p-p bonds) formed by Bargapten, Psoralene, Psoralenoside, Germanicol acetate and standard drugs against targets: adrenergic α1 receptor, muscranic M1, muscranic M3, dopaminergic D2, calmodulin, mu-opioid, voltage gated L-Type calcium channel, histaminergic H1, histaminergic H2 and H+/K+ ATPase pump

Proteins PDB ID Bargapten Psoralene Psoralenoside Germanicol acetate Standard drugs
π-π bonds Amino Acids π-π bonds Amino Acids π-π bonds Amino Acids π-π bonds Amino Acids π-π bonds Amino Acids
Adrenergic α1 3538 2

TRP 295

PHE 299

1

PHE 299

CYS 181

1 VAL 168 0 3A

PHE 299

TRP 295

PHE 298

Muscranic M1 5CXV 2

TYR 381

TYR 106

3

TYR 404

TRP 378

CYS 407

2

ALA 363

LYS 362

0 1B TYR 404
Muscranic M3 4 U14 1 TYR 506 1 TRP 503 1 TYR 1018 0 0C
Dopaminergic D2 6CM4 4

TRP 386

PHE 386

PHE 390

ASP 114

4

PHE 390

TRP 386

PHE 198

PHE 389

2

THR 412

TRP 100

1 TYR 408 4D

ASP 114

PHE 389

LEU 94

TRP 100

Calmodulin 1CTR 2

MET 124

PHE 92

1 LEU 105 2

GLU 11

MET 72

0 5E

MET 144

MET 145

MET 109

LEU 105

PHE 92

Calcium channel 1T3S 3

LEU 86

GLU 87

2

ARG 65

GLU 87

0 0 1F ARG 413
Histaminergic H1 3RZE 2

ARG 97

CYS 180

2

ARG 97

CYS 180

0 0 2G

PHE 1104

GLU 1011

H+/K+ ATPase 5YLU 1 PHE 909 1 GLY 611 1 ASP 443 0 1H ARG 544
Histaminergic H2 P25021 2

PHE 249

PHE 171

3

PHE 171

PHE 249

VAL 92

1 PHE 171 0 2I

PHE 267

VAL 268

Mu Opioid 5C1M 3

VAL 300

MET 151

TRP 293

3

TYR 494

CYS 407

TRP 378

2

THR 1142

ARG 1145

1 PHE 239 3J

ILE 296

HIS 297

TRP 293

Standard inhibitors or activators are: (A) phenoxy benzamine, (B) piranzapine, (C) atropine, (D) domperidone, (E) calmozolium, (F) verapamil, (G) pyrilimine, (H) omeprazole, (I) ranitidine and (J) loperamide. Amino acids are: ALA, alanine; GLN, glutamine; GLY, glycine; HIS, histidine; LYS, lysine; PHE, phenylalanine; SER, Serine; TRP, tryptophan and TYR, tyrosine and VAL, valine