Table 1.
Summary of ChIP-seq results.Three biological replicates were sequenced per tissue and mark.
| Hypothalamus | Muscle P. major | |||
|---|---|---|---|---|
| H3K4me3 | H3K27me3 | H3K4me3 | H3K27me3 | |
| Analyzed peaks | 30597 | 23098 | 75943 | 26562 |
| Number of DP | 785 | 148 | 45 | 20 |
| % DP | 2.57 | 0.64 | 0.06 | 0.08 |
| Number of DP up | 147 | 37 | 7 | 4 |
| Number of DP down | 638 | 111 | 38 | 16 |
| Genes containing DP | 975 | 69 | 44 | 17 |
Reads were mapped against the chicken genome Galgal5, and peaks were detected using PePr for H3K4me3 and epic for H3K27me3. DP, Differential Peaks. Comparisons (DP up, DP down) were calculated as TM vs. control.