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. 2019 Dec 3;8(12):giz125. doi: 10.1093/gigascience/giz125

Table 3:

Statistics of KOREF genome assemblies using ONT PromethION and PacBio Sequel sequencing with Hi-C mapping information

Statistic ONT PromethION R9.4.1 assembly with Hi-C PacBio Sequel assembly with Hi-C
27× 64× 30× 62×
Scaffolds No. 2,313 3,179 1,476 2,139
Total length (bp) 2,757,776,303 2,827,900,542 2,801,450,512 2,815,594,432
N50 (bp) 32,758,624 56,457,651 38,113,117 59,361,327
Maximum scaffold length (bp) 120,666,262 175,227,974 126,818,544 174,360,016
Gap 0.02% 0.01% 0.02% 0.01%
GC content 40.82% 40.81% 40.90% 40.90%