Table 3:
Statistic | ONT PromethION R9.4.1 assembly with Hi-C | PacBio Sequel assembly with Hi-C | ||
---|---|---|---|---|
27× | 64× | 30× | 62× | |
Scaffolds No. | 2,313 | 3,179 | 1,476 | 2,139 |
Total length (bp) | 2,757,776,303 | 2,827,900,542 | 2,801,450,512 | 2,815,594,432 |
N50 (bp) | 32,758,624 | 56,457,651 | 38,113,117 | 59,361,327 |
Maximum scaffold length (bp) | 120,666,262 | 175,227,974 | 126,818,544 | 174,360,016 |
Gap | 0.02% | 0.01% | 0.02% | 0.01% |
GC content | 40.82% | 40.81% | 40.90% | 40.90% |