Table 3.
Computed relative hybridization free energies between miR-22 and antagomirs with PS, LNA or PS-LNA modifications.
| ID | Antagomir sequence | Description | ΔΔGhyb
(kcal/mol) |
sd (kcal/mol) |
|---|---|---|---|---|
| A-0 | 5’-dT-dG-dG-dC-dA-dG-dC-dT-3’ | DNA | 0 | -- |
| A-11 | 5’-dTSpdGSpdGSpdCSpdASpdGSpdCSpdT-3’ | Sp 7 | 3.9 | 1.9 |
| A-12 | 5’-dTRpdGRpdGRpdCRpdARpdGRpdCRpdT-3’ | Rp 7 | 0.4 | 2.0 |
| A-13 | 5’-dTSpdGRpdGSpdCRpdASpdGRpdCSpdT-3’ | Sp 4 Rp 3 | 0.9 | 2.0 |
| A-14 | 5’-dTRpdGSpdGRpdCSpdARpdGSpdCRpdT-3’ | Sp 3 Rp 4 | −0.4 | 1.8 |
| A-20 | 5’-lnT-lnG-lnG-lnC-lnA-lnG-lnC-lnT-3’ | Ln 8 | −3.2 | 1.1 |
| A-21 | 5’-lnTSplnGSplnG-lnC-lnA-lnGSplnCSplnT-3’ | Ln 8, Sp 4 | −3.7 | 1.2 |
| A-22 | 5’-lnTRplnGRplnG-lnC-lnA-lnGRplnCRplnT-3’ | Ln 8, Rp 4 | −2.4 | 1.6 |
| A-31 | 5’-lnTSplnGSplnGSplnCSplnASplnGSplnCSplnT-3’ | Ln 8, Sp 7 | −2.6 | 2.4 |
| A-32 | 5’-lnTRplnGRplnGRplnCRplnARplnGRplnCRplnT-3’ | Ln 8, Rp 7 | −2.8 | 2.2 |
| A-40 | 5’-lnT-lnG-dG-dC-dA-lnG-lnC-lnT-3’ | Ln 5 | −1.4 | 0.7 |
| A-41 | 5’-lnTSplnGSpdG-dC-dA-lnGSplnCSplnT-3’ | Ln 5, Sp 4 | −3.2 | 0.9 |
| A-42 | 5’-lnTRplnGRpdG-dC-dA-lnGRplnCRplnT-3’ | Ln 5, Rp 4 | −1.6 | 1.2 |