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. 2019 Dec 3;9:18249. doi: 10.1038/s41598-019-54815-6

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© The Author(s) 2019

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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The distribution of transposable elements (TEs) in the T. cinerariifolium genome. The distributions of TEs for sire (A), oryco (B) and all clade (C) were shown with the circles. The number of TEs coded in each scaffold regions within each 20 Kb region was plotted on the outer circle and %GC content in each 20 Kb was represented with heatmap on the inner circle. (D) The number of sire, oryco and all clade existing 20 Kb around respective TE was shown with histogram.