Table 1.
Trait | Chr | QTL Loci | Peak Pos (cM) | Nearest Marker | LOD Score | 2.0 LOD Interval | Additive Effect (a) | Percent Variation (%) R 2 | |||
Left Locus | Left cM | Right Locus | Right cM | ||||||||
CT | 1 | qCT1.1 | 39.8 | SNP.120657 | 6.1 | SNP.10249 | 37.9 | SNP.9737 | 43.1 | 0.34 | 18.4 |
ECH | 1 | qECH1.1 | 44.1 | SNP.9649 | 17.4 | SNP.9649 | 43.9 | SNP.9341 | 44.9 | −6.40 | 38.1 |
3 | qECH3.1 | 87.8 | SNP.31473 | 6.7 | SNP.32685 | 82.8 | SNP.117081 | 89.1 | 3.60 | 11.5 | |
4 | qECH4.1 | 73.0 | SNP.128649 | 4.1 | SNP.55545 | 71.6 | SNP.146469 | 77.3 | −2.69 | 6.7 | |
ID | 1 | qID1.1 | 43.6 | SNP.9649 | 28.7 | SNP.9649 | 43.5 | SNP.9649 | 44.1 | −7.50 | 58.3 |
4 | qID4.1 | 69.8 | SNP.55081 | 4.6 | SNP.140945 | 67.9 | SNP.128649 | 72.6 | −2.07 | 4.5 | |
6 | qID6.1 | 51.8 | SNP.85409 | 6.8 | SNP.84997 | 50.7 | SNP.86689 | 53.1 | −2.66 | 6.9 | |
DLD | 1 | qDLB1.1 | 37.4 | SNP.9941 | 18.0 | SNP.9941 | 37.0 | SNP.10249 | 37.9 | −0.94 | 42.5 |
2 | qDLB2.1 | 54.2 | SNP.143745 | 3.9 | SNP.23461 | 52.8 | SNP.131577 | 56.5 | 0.38 | 6.9 | |
6 | qDLB6.1 | 52.2 | SNP.175561 | 5.0 | SNP.84997 | 50.8 | SNP.128265 | 53.6 | −0.44 | 8.8 | |
ECW | 4 | qECW4.1 | 64.6 | SNP.52733 | 5.8 | SNP.55017 | 61.8 | SNP.53205 | 65.7 | 2.23 | 14.8 |
5 | qECW5.1 | 15.7 | SNP.76545 | 5.5 | SNP.134473 | 15.2 | SNP.77021 | 17.0 | 2.09 | 14.5 | |
NLD | 4 | qNLB4.1 | 64.6 | SNP.52733 | 4.6 | SNP.122297 | 63.9 | SNP.53205 | 65.5 | −2.96 | 12.6 |
6 | qNLB6.1 | 32.8 | SNP.151005 | 3.8 | SNP.90761 | 30.8 | SNP.89757 | 35.6 | −3.53 | 10.3 | |
Negative additive effect values (a) indicate that the allele is derived from parent Gy14. Positive additive effect values (a) indicate that the allele is derived from parent CL9930. |