Table 3.

A: DBN results for the RNA-Seq data set. B: SVM results for the RNA-Seq data set

A.
		DBN			DBN and SVM
Model	Architecture	A %	TPR %	TNR %	A %	TPR %	TNR %
DBN + Bprop	A-500-250-100-1	95.48±0.25	98.06±0.40	92.90±0.36	94.13±0.27	97.58±0.27	91.94±0.34
DBN + Bprop	A-100-1	95.65±0.13	97.90±0.25	93.39±0.16	94.19±0.11	95.16±0.50	93.23±0.22
DBN + Rprop	A-5-10-1	95.73±0.17	98.39±0.50	93.06±0.34	95.89±0.08	98.39±0.50	93.39±0.16
DBN + Rprop	A-50-1	95.16±0.50	98.39±0.50	91.94±0.50	95.97±0.50	98.39±0.50	93.55±0.50
Task: AC vs N; non-coding, A=3124
DBN + Bprop	A-2000-1000-500-1	96.77±0.50	100±0.50	93.55±0.50	95.16±0.50	96.94±0.16	93.39±0.16
DBN + Bprop	A-100-1	95.97±0.50	100±0.50	91.94±0.50	95.48±0.13	97.42±0.26	93.55±0.50
DBN + Rprop	A-5-10-1	96.05±0.22	98.39±0.50	93.71±0.45	96.45±0.13	98.06±0.22	94.84±0.22
DBN + Rprop	A-50-1	94.35±0.50	100±0.50	88.71±0.50	95.48±0.13	98.39±0.50	92.58±0.26
B.
		Radial			Linear
Data	Features	A %	TPR %	TNR %	A %	TPR %	TNR %
Protein-coding	12360	93.66±0.81	92.66±0.87	94.66±0.91	93.00±0.89	90.00±0.89	96.00±0.85
Non-coding	3124	91.41±0.97	88.00±0.99	94.83±0.56	93.91±0.89	90.50±0.73	97.33±0.72

The best results are shown in bold