Table 5. Results of the gene-set analysis for the direct comparison W29 glycerol vs. W29 glucose. Gene-sets have been manually curated to reduce redundancy and only gene sets with p-value < 0.05 are shown. The amount of significant genes (p-value < 0.05) in a gene-set are provided together with the total amount of genes in the gene-set. Up: gene sets containing mainly upregulated genes. Down: gene sets containing mainly downregulated genes.
| Gene-set | Gene-set p-value | sig. genes | GO term | |
|---|---|---|---|---|
| ATP catabolic process | 1.00E-04 | 2 / 98 | GO:0006200 | |
| carbohydrate metabolic process | 1.00E-04 | 4 / 69 | GO:0005975 | |
| cellular amino acid biosynthetic process | 1.00E-04 | 3 / 34 | GO:0008652 | |
| filamentous growth of a population of unicellular organisms in response to starvation | 1.00E-04 | 2 / 63 | GO:0036170 | |
| up | lysine biosynthetic process | 1.00E-04 | 2 / 8 | GO:0009085 |
| phospholipid binding | 1.00E-04 | 2 / 25 | GO:0005543 | |
| regulation of transcription from RNA polymerase II promoter | 1.00E-04 | 8 / 104 | GO:0006357 | |
| regulation of transcription, DNA-templated | 1.00E-04 | 11 / 245 | GO:0006355 | |
| zinc ion binding | 1.00E-04 | 9 / 376 | GO:0008270 | |
| triglyceride lipase activity | 1.50E-04 | 2 / 21 | GO:0004806 | |
| N-acetyltransferase activity | 2.00E-04 | 3 / 29 | GO:0008080 | |
| down | peptidase activity | 6.00E-03 | 6 / 113 | GO:0008233 |
| glucose transport | 1.25E-02 | 1 / 6 | GO:0015758 | |
| oxidation-reduction process | 1.34E-02 | 15 / 411 | GO:0055114 |