Table 1.
a. Phylum Level | ||||||
Bacterial | ZT20 | ZT4 | ||||
Cellulose | M-Inulin | p-Value | Cellulose | E-Inulin | p-Value | |
Actinobacteria | 0.0072 ± 0.0039 | 0.0103 ± 0.0081 | 0.7143 | 0.0690 ± 0.0647 | 0.0907 ± 0.0440 | 0.8254 |
Bacteroidetes | 0.1535 ± 0.0463 | 0.2499 ± 0.0654 | 0.669 | 0.1647 ± 0.0467 | 0.3644 ± 0.1203 | 0.2085 |
Deferribacteres | 0.0011 ± 0.0010 | 0.0005 ± 0.0004 | 0.9999 | 0.0002 ± 0.0002 | 0.0004 ± 0.0003 | 0.8413 |
Firmicutes | 0.8221 ± 0.0467 | 0.6863 ± 0.0713 | 0.3232 | 0.7486 ± 0.0228 | 0.5294 ± 0.0865 | 0.0743 |
Proteobacteria | 0.0111 ± 0.0033 | 0.0019 ± 0.0004 | 0.0159 # | 0.0152 ± 0.0030 | 0.0054 ± 0.0017 | 0.1905 |
TM7 | 0.0043 ± 0.0025 | 0.0004 ± 0.0003 | 0.0159 # | 0.0017 ± 0.0002 | 0.0001 ± 0.0001 | 0.0159 # |
Verrucomicrobia | 0.0006 ± 0.0003 | 0.0473 ± 0.0219 | 0.1905 | 0.0003 ± 0.003 | 0.0132 ± 0.0117 | 0.1032 |
b. Genus Level | ||||||
Bacterial | ZT20 | ZT4 | ||||
Cellulose | M-Inulin | p-Value | Cellulose | E-Inulin | p-Value | |
Bifidobacterium | 0.0022 ± 0.0018 | 0.0080 ± 0.0077 | 0.5556 | 0.0063 ± 0.0062 | 0.0088 ± 0.0044 | 0.6825 |
Adlercreutzia | 0.0046 ± 0.0019 | 0.0022 ± 0.0004 | 0.2344 | 0.0047 ± 0.0014 | 0.0026 ± 0.0006 | 0.6428 |
Bacteroides | 0.0463 ± 0.0175 | 0.1100 ± 0.0262 | 0.0993 | 0.0701 ± 0.0238 | 0.1953 ± 0.0627 | 0.1352 |
Parabacteroides | 0.0010 ± 0.0003 | 0.0009 ± 0.0002 | 0.8247 | 0.0015 ± 0.0006 | 0.0010 ± 0.0003 | 0.6229 |
AF12 | 0.0075 ± 0.0023 | 0.0011 ± 0.0006 | 0.0435 # | 0.0052 ± 0.0013 | 0.0009 ± 0.0002 | 0.0317 # |
Butyricimonas | 0.0004 ± 0.0001 | 0.0008 ± 0.0004 | 0.0317 # | 0.0005 ± 0.0003 | 0.0002 ± 0.0001 | 0.7937 |
Odoribacter | 0.0017 ± 0.0003 | 0.0006 ± 0.0002 | 0.1795 | 0.0020 ± 0.0008 | 0.0003 ± 0.0001 | 0.0308 $ |
[Prevotella] | 0.0144 ± 0.0085 | 0.0303 ± 0.0098 | 0.2857 | 0.0118 ± 0.0064 | 0.0375 ± 0.0279 | 0.9762 |
Staphylococcus | 0.0013 ± 0.0006 | 0.0002 ± 0.0001 | 0.0397 # | 0.0009 ± 0.0006 | 0.0005 ± 0.0002 | 0.8254 |
Lactobacillus | 0.0294 ± 0.0230 | 0.0136 ± 0.0036 | 0.6825 | 0.1152 ± 0.0811 | 0.0631 ± 0.0323 | 0.873 |
Lactococcus | 0.2862 ± 0.0453 | 0.0957 ± 0.0128 | 0.0159 # | 0.1691 ± 0.0446 | 0.0856 ± 0.0136 | 0.2857 |
Streptococcus | 0.0034 ± 0.0016 | 0.0011 ± 0.0002 | 0.1545 | 0.0037 ± 0.0016 | 0.0019 ± 0.0010 | 0.357 |
Clostridium | 0.0002 ± 0.0001 | 0.0001 ± 0.00005 | 0.3889 | 0.0014 ± 0.0012 | 0.0003 ± 0.0002 | 0.3889 |
Dehalobacterium | 0.0018 ± 0.0002 | 0.0017 ± 0.0006 | 0.873 | 0.0010 ± 0.0001 | 0.0010 ± 0.0007 | 0.1746 |
Coprococcus | 0.0049 ± 0.0009 | 0.0081 ± 0.0032 | 0.9999 | 0.0035 ± 0.0007 | 0.0019 ± 0.0005 | 0.1905 |
Dorea | 0.0032 ± 0.0011 | 0.0032 ± 0.0012 | 0.9966 | 0.0041 ± 0.0031 | 0.0020 ± 0.0012 | 0.5089 |
Roseburia | 0.0018 ± 0.0010 | 0.0053 ± 0.0038 | 0.9762 | 0.0005 ± 0.0004 | 0.0004 ± 0.0001 | 0.5635 |
[Ruminococcus] | 0.0305 ± 0.0113 | 0.0384 ± 0.0105 | 0.6271 | 0.0327 ± 0.0129 | 0.0240 ± 0.0094 | 0.5957 |
Oscillospira | 0.0803 ± 0.0131 | 0.0290 ± 0.0088 | 0.0148 $ | 0.0600 ± 0.0173 | 0.0172 ± 0.0074 | 0.0404 $ |
Ruminococcus | 0.0096 ± 0.0019 | 0.0067 ± 0.0032 | 0.4961 | 0.0056 ± 0.0017 | 0.0025 ± 0.0010 | 0.161 |
Allobaculum | 0.0017 ± 0.0007 | 0.1764 ± 0.0544 | 0.1905 | 0.0662 ± 0.0649 | 0.1669 ± 0.1094 | 0.5238 |
Bilophila | 0.0013 ± 0.0003 | 0.0003 ± 0.0002 | 0.0159 # | 0.0011 ± 0.0005 | 0.0002 ± 0.0001 | 0.1111 |
Desulfovibrio | 0.0037 ± 0.0011 | 0.0006 ± 0.0004 | 0.047 # | 0.0021 ± 0.0007 | 0.0019 ± 0.0002 | 0.371 |
Akkermansia | 0.0006 ± 0.0002 | 0.0473 ± 0.0219 | 0.1905 | 0.0003 ± 0.0003 | 0.0132 ± 0.0117 | 0.1032 |
(a) Number of bacteria significantly changed by M-inulin/all number of bacteria well-detected = 2/7. Number of bacteria significantly changed by E-inulin/all number of bacteria well-detected = 1/7. # p < 0.05, evaluated using the Mann–Whitney test with a two-stage linear step-up procedure of the Benjamini, Krieger, and Yekutieli test for multiple comparisons. (b) Number of bacteria significantly changed by M-inulin/all number of bacteria well-detected = 7/24. Number of bacteria significantly changed by E-inulin/all number of bacteria well-detected = 3/24. $ p < 0.05, evaluated using the two-way ANOVA with Sidak post hoc test. # p < 0.05, evaluated using the Mann–Whitney test with a two-stage linear step-up procedure of the Benjamini, Krieger, and Yekutieli test for multiple comparisons.