Table 2.
a. Phylum Level | ||||||
Bacterial | ZT20 | ZT4 | ||||
Cellulose | M-Inulin | p-Value | Cellulose | E-Inulin | p-Value | |
Actinobacteria | 0.0041 ± 0.0017 | 0.0364 ± 0.0199 | 0.0174 # | 0.0321 ± 0.0154 | 0.0871 ± 0.0380 | 0.1797 |
Bacteroidetes | 0.0759 ± 0.0296 | 0.1372 ± 0.0337 | 0.3748 | 0.1024 ± 0.0275 | 0.1609 ± 0.0411 | 0.4069 |
Deferribacteres | 0.0037 ± 0.0016 | 0.0018 ± 0.0006 | 0.5714 | 0.0007 ± 0.0004 | 0.0002 ± 0.00006 | 0.4459 |
Firmicutes | 0.80427 ± 0.0240 | 0.7513 ± 0.0306 | 0.1797 | 0.7832 ± 0.0207 | 0.6906 ± 0.0373 | 0.1298 |
Proteobacteria | 0.1119 ± 0.0161 | 0.0706 ± 0.0120 | 0.0799 | 0.0790 ± 0.0141 | 0.0568 ± 0.0102 | 0.4449 |
Verrucomicrobia | 0.0001 ± 0.0001 | 0.0025 ± 0.0011 | 0.0606 | 0.0025 ± 0.0022 | 0.0042 ± 0.0036 | 0.5455 |
b. Genus Level | ||||||
Bacterial | ZT20 | ZT4 | ||||
Cellulose | M-Inulin | p-Value | Cellulose | E-Inulin | p-Value | |
Bifidobacterium | 0.0004 ± 0.0003 | 0.0305 ± 0.0192 | 0.0043 ## | 0.0266 ± 0.0151 | 0.0785 ± 0.0367 | 0.1775 |
Adlercreutzia | 0.0036 ± 0.0017 | 0.0037 ± 0.0010 | 0.5714 | 0.0051 ± 0.0008 | 0.0041 ± 0.0008 | 0.3874 |
Bacteroides | 0.0222 ± 0.0103 | 0.0327 ± 0.0078 | 0.4395 | 0.0149 ± 0.0051 | 0.0313 ± 0.0101 | 0.1801 |
Parabacteroides | 0.0059 ± 0.0027 | 0.0032 ± 0.0010 | 0.8983 | 0.0048 ± 0.0012 | 0.0025 ± 0.0005 | 0.3874 |
Butyricimonas | 0.0002 ± 0.00008 | 0.0001 ± 0.00004 | 0.6623 | 0.0003 ± 0.0001 | 0.0002 ± 0.0001 | 0.6591 |
Odoribacter | 0.0015 ± 0.0003 | 0.0022 ± 0.0012 | 0.8983 | 0.0023 ± 0.0004 | 0.0031 ± 0.0007 | 0.3874 |
[Prevotella] | 0.0066 ± 0.0031 | 0.0151 ± 0.0102 | 0.5541 | 0.0033 ± 0.0018 | 0.0056 ± 0.0045 | 0.9805 |
Mucispirillum | 0.0037 ± 0.0016 | 0.0018 ± 0.0006 | 0.5714 | 0.0007 ± 0.0004 | 0.0001 ± 0.00006 | 0.4459 |
Staphylococcus | 0.0005 ± 0.0002 | 0.00005 ± 0.00003 | 0.145 | 0.0009 ± 0.0004 | 0.00007 ± 0.00002 | 0.0022 ## |
Lactobacillus | 0.0080 ± 0.0031 | 0.0088 ± 0.0027 | 0.8983 | 0.1050 ± 0.0530 | 0.01225 ± 0.0046 | 0.1797 |
Lactococcus | 0.2490 ± 0.0332 | 0.1468 ± 0.0205 | 0.094 | 0.3408 ± 0.0271 | 0.1824 ± 0.0494 | 0.0078 $$ |
Streptococcus | 0.0048 ± 0.0011 | 0.0013 ± 0.0002 | 0.0087 ## | 0.0037 ± 0.0005 | 0.0023 ± 0.0006 | 0.0931 |
SMB53 | 0.0102 ± 0.0079 | 0.0130 ± 0.0078 | 0.9394 | 0.0467 ± 0.0224 | 0.0132 ± 0.0076 | 0.1688 |
Dehalobacterium | 0.0017 ± 0.0004 | 0.0024 ± 0.0006 | 0.5628 | 0.0007 ± 0.0002 | 0.0021 ± 0.0008 | 0.132 |
Blautia | 0.0004 ± 0.0001 | 0.0003 ± 0.00008 | 0.7381 | 0.0002 ± 0.0001 | 0.0003 ± 0.0001 | 0.1991 |
Coprococcus | 0.0093 ± 0.0009 | 0.0116 ± 0.0026 | 0.7879 | 0.0028 ± 0.0005 | 0.0048 ± 0.0016 | 0.3874 |
Dorea | 0.0017 ± 0.0004 | 0.0034 ± 0.0007 | 0.077 | 0.0011 ± 0.0003 | 0.0042 ± 0.0006 | 0.0016 $$ |
Roseburia | 0.00006 ± 0.00002 | 0.00005 ± 0.00003 | 0.9242 | 0.00007 ± 0.00002 | 0.0001 ± 0.00007 | 0.3398 |
[Ruminococcus] | 0.0652 ± 0.0085 | 0.0509 ± 0.0082 | 0.3544 | 0.0299 ± 0.0059 | 0.0347 ± 0.0073 | 0.882 |
Anaerotruncus | 0.0004 ± 0.0001 | 0.0001 ± 0.00005 | 0.1797 | 0.0001 ± 0.00004 | 0.0003 ± 0.0001 | 0.8312 |
Oscillospira | 0.0473 ± 0.0076 | 0.0213 ± 0.0052 | 0.0043 $$ | 0.0217 ± 0.0042 | 0.0158 ± 0.0022 | 0.6797 |
Ruminococcus | 0.0082 ± 0.0009 | 0.0034 ± 0.0007 | 0.0012 $$ | 0.0035 ± 0.0008 | 0.0020 ± 0.0003 | 0.7285 |
Allobaculum | 0.0011 ± 0.0006 | 0.1122 ± 0.0562 | 0.0022 ## | 0.0327 ± 0.0157 | 0.1703 ± 0.0513 | 0.0449 # |
Catenibacterium | 0.0005 ± 0.0001 | 0.0003 ± 0.0001 | 0.3874 | 0.0004 ± 0.00009 | 0.0003 ± 0.0001 | 0.474 |
Desulfovibrio | 0.0010 ± 0.0005 | 0.0011 ± 0.0007 | 0.9073 | 0.0006 ± 0.0002 | 0.0023 ± 0.0009 | 0.1001 |
Citrobacter | 0.0030 ± 0.0011 | 0.0026 ± 0.0004 | 0.7879 | 0.0026 ± 0.0004 | 0.0015 ± 0.0003 | 0.0931 |
Klebsiella | 0.0417 ± 0.0147 | 0.0328 ± 0.0138 | 0.5714 | 0.0412 ± 0.0105 | 0.0291 ± 0.0124 | 0.1797 |
Akkermansia | 0.0001 ± 0.0001 | 0.0025 ± 0.0011 | 0.4545 | 0.0024 ± 0.0022 | 0.0041 ± 0.0036 | 0.5455 |
(a) Number of bacteria significantly changed by M-inulin/all number of bacteria well-detected = 1/6. Number of bacteria significantly changed by E-inulin/all number of bacteria well-detected = 0/6. # p < 0.05, evaluated using the Mann–Whitney test with a two-stage linear step-up procedure of the Benjamini, Krieger, and Yekutieli test for multiple comparisons. (b) Number of bacteria significantly changed by M-inulin/all number of bacteria well-detected = 5/28. Number of bacteria significantly changed by E-inulin/all number of bacteria well-detected = 4/28. $$ p < 0.01, evaluated using the two-way ANOVA with Sidak post hoc test. ## p < 0.01, # p < 0.05, evaluated using the Mann–Whitney test with a two-stage linear step-up procedure of the Benjamini, Krieger, and Yekutieli test for multiple comparisons.