Table 3.
The percentage of the cancer consensus gene in the significant genes by different methods
| WITER | ITER | MutSigCV | oncodriveFML | dNdScv | |
|---|---|---|---|---|---|
| BLCA | 56.7 | 63.2 | 83.3 | 100 | 77.3 |
| BRCA | 95.5 | 94.7 | 88.2 | 100 | 100 |
| COAD | 65.2 | 92.9 | 88.9 | 66.7 | 92.9 |
| HNSC | 73.7 | 73.3 | 83.3 | 77.8 | 72.2 |
| KIRC | 100 | 100 | 100 | 100 | 100 |
| LUAD | 90.9 | 100 | 84.6 | 100 | 64.7 |
| LUSC | 88.9 | 100 | 100 | NA | 72.7 |
| OV | 100 | 100 | 100 | 100 | 100 |
| SKCM | 78.6 | 80 | 71.4 | 57.1 | 80 |
| STAD | 100 | 88.9 | 100 | NA | 81.8 |
| UCEC | 85 | 81 | 100 | 66.7 | 90 |
| Average | 85 | 88.5 | 90.9 | 87.7 | 84.7 |
Note: The full names of cancers are in Supplementary Table S1.