Table 2.
Summary of RNA-seq data from human coronary artery segments
| Mapping Statistics | LM | LAD-p | LAD-m | LAD-d | LCX-p | LCX-m | LCX-d | RCA-p | RCA-m | RCA-d |
|---|---|---|---|---|---|---|---|---|---|---|
| Total reads | 81008982 | 80934204 | 83597902 | 79731964 | 86375208 | 89708382 | 87117902 | 91565414 | 95308074 | 88039124 |
| Total mapped | 77340347 (95.47%) | 76512757 (94.54%) | 80048831 (95.75%) | 75492316 (94.68%) | 82347313 (95.34%) | 83766351 (93.38%) | 81991150 (94.12%) | 86353960 (94.31%) | 89927162 (94.35%) | 82560897 (93.78%) |
| Multiple mapped | 1557844 (1.92%) | 1484754 (1.83%) | 1728891 (2.07%) | 1476153 (1.85%) | 1478971 (1.71%) | 2151166 (2.4%) | 1545923 (1.77%) | 1625534 (1.78%) | 1727173 (1.81%) | 2227193 (2.53%) |
| Uniquely mapped | 75782503 (93.55%) | 75028003 (92.7%) | 78319940 (93.69%) | 74016163 (92.83%) | 80868342 (93.62%) | 81615185 (90.98%) | 80445227 (92.34%) | 84728426 (92.53%) | 88199989 (92.54%) | 80333704 (91.25%) |
| Read-1 | 38333521 (47.32%) | 37891974 (46.82%) | 39555038 (47.32%) | 37421808 (46.93%) | 40857556 (47.3%) | 41342112 (46.09%) | 40612792 (46.62%) | 42792337 (46.73%) | 44536251 (46.73%) | 40639188 (46.16%) |
| Read-2 | 37448982 (46.23%) | 37136029 (45.88%) | 38764902 (46.37%) | 36594355 (45.9%) | 40010786 (46.32%) | 40273073 (44.89%) | 39832435 (45.72%) | 41936089 (45.8%) | 43663738 (45.81%) | 39694516 (45.09%) |
| Reads map to ‘+’ | 37842003 (46.71%) | 37464703 (46.29%) | 39114938 (46.79%) | 36950027 (46.34%) | 40381439 (46.75%) | 40751661 (45.43%) | 40163119 (46.1%) | 42292827 (46.19%) | 44027518 (46.19%) | 40102122 (45.55%) |
| Reads map to ‘-’ | 37940500 (46.83%) | 37563300 (46.41%) | 39205002 (46.9%) | 37066136 (46.49%) | 40486903 (46.87%) | 40863524 (45.55%) | 40282108 (46.24%) | 42435599 (46.34%) | 44172471 (46.35%) | 40231582 (45.7%) |
| Non-splice reads | 60759773 (75.00%) | 59464902 (73.47%) | 59162354 (70.77%) | 57903647 (72.62%) | 62543169 (72.41%) | 57797857 (64.43%) | 62423074 (71.65%) | 68021755 (74.29%) | 69447603 (72.87%) | 58092830 (65.99%) |
| Splice reads | 15022730 (18.54%) | 15563101 (19.23%) | 19157586 (22.92%) | 16112516 (20.21%) | 18325173 (21.22%) | 23817328 (26.55%) | 18022153 (20.69%) | 16706671 (18.25%) | 18752386 (19.68%) | 22240874 (25.26%) |
| Reads mapped in proper pairs | 73341430 (90.53%) | 72504700 (89.58%) | 75891128 (90.78%) | 71297316 (89.42%) | 78269326 (90.62%) | 78601042 (87.62%) | 77598302 (89.07%) | 81741958 (89.27%) | 84962628 (89.15%) | 77221958 (87.71%) |
| Proper-paired reads map to different chromosome | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) | 0 (0%) |
LM, left main trunk; LAD-p, proximal segment of the left anterior descending; LAD-m, midsegment of the left anterior descending; LAD-d, distal segment of the left anterior descending; LCX-p, proximal segment of the left circumflex; LCX-m, midsegment of the left circumflex; LCX-d, distal segment of the left circumflex; RCA-p, proximal segment of the right coronary artery; RCA-m, midsegment of the right coronary artery; RCA-d, distal segment of the right coronary artery.